Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe03g00218 | ATGTTTGTGATCGTTGACTTACGAGCGGATAATCCAATATATAAACCAATGTTGCTTACCTTGACGCTCCCATGGTGGAACGCACGTCGGCAAGTAGTGCCTCTCCACCTCCTTCTTCCTTCGCTATATGAACCTCCGCAACCCTCACCCACCCACACACACACTGGCTTTTACAGACACCACAACTTCAAGATGGGACCTCTATTGCGGCTCACAATGGCGGCTTCTGTTCTAATCGGCTGCATCAACATTGTAGCAGCGACGAACGAATACGACATCATTCATATCGGCGGAAAAGTTCTCTGCCAGGACTGCACCCAGGGGTGGAACGAGTGGATCAATGGCAAACCGCTCAAAGATTGTAAGGTATCTGTAACGTGTTTGGACGAGAGAAGCAGAGTGATACACTATACGAGTGATCTAACGGACGAATTAGGGCAATTTGATATCAAAATGGAAAAGGTGATGCACGGCAAGAAATTGAACCCCAAGAAATGCTCGGTTCGGCTCGTTTCGTCTCCGGATCCGTCCTGCAACACCATGACTGATTTTGCCGGCGGCCGCTCTGGCGTTCAACTCCGGGGACCGAGCTTGGTGTATCGCGATTTGGTCAAGTACGTGCTAGGACCATTTTACTTCACTTCGCCTATGTGCGAGGAACCTGATACAGATGGCTCCGATGATAACGGTGGGGGGAGTAATTACTGA | 708 | 49.72 | MFVIVDLRADNPIYKPMLLTLTLPWWNARRQVVPLHLLLPSLYEPPQPSPTHTHTGFYRHHNFKMGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKKLNPKKCSVRLVSSPDPSCNTMTDFAGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTDGSDDNGGGSNY | 235 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1090163 | 1091115 | - | Cp4.1LG03g01190.1 | Cpe03g00218 | 465935 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe03g00218 | 235 | Pfam | Pollen protein Ole e 1 like | 96 | 190 | - | - | |
| Cpe03g00218 | 235 | PANTHER | POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN | 72 | 225 | - | - | |
| Cpe03g00218 | 235 | PANTHER | OS01G0164075 PROTEIN | 72 | 225 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe03g00218 | Cpe-Chr3:1090163 | Cpe10g00192 | Cpe-Chr10:1117121 | 1.17E-08 | dispersed | |
| Cpe19g01020 | Cpe-Chr19:7108855 | Cpe03g00218 | Cpe-Chr3:1090163 | 8.92E-09 | dispersed | |
| Cpe03g00218 | Cpe-Chr3:1090163 | Cpe20g00438 | Cpe-Chr20:2514604 | 1.87E-09 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe03g00218 | - | - | cpep:111791287 | 436.802 |