Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00222 | ATGGCGTCGAAGGAAATGAAGAAGGAGAGAGCAGAGGTAGCGGCGAGGCTTGCTGCTTCCGATCTCAGAGACATTAACAGAGACGAGGAGCAGCACGCAGCGGCGCCTGGAACCGAGAAAAAAGCCACGGTGGAGGTCGTGGAGACGGACCGGGCGGCGGCACATGATCAGCAGCAGAGGTCCGGCGTGATTGGATCTGTACTGAAGGCGGTGCAGGACACGTATGAACACGCGAAGGAGGCGGTGGTTGGGAAGAGCCAGGAAGCGGAGGAGAGAGGTCAGGAGGTGAAGGACGCGTCGGCGGAGAAGGCAAGAGAGACGACAGAGGAGGCGAAGAGGAAAATGGACGAGTATGGAAGTGCAGCGGCAGAGAAGGCGAGGGAGACGAAGGAAGCCACCGGCGATACGGTGGCGTCGGCGAGAGGGAAAATGAGTGAATATGGAGAGAAAACGAAGGACAAGACAGGCGAATACACAGATTATGCGGCGGATAAGGCGAGGGAGACGAAGGACGCGGCGGCAAGAAAAGCAGGGGAATACAAAGACTATACAGCGGAGAAGACGACGGAGGCTACAGAATCCGCAAAAGGAAAGGCCGGCGAGTATAAGGATTACGCAGCGGAGAAGGCGAGGGAAGCAAAGGACGCTGCGGCGAGAAAAGCAGGGGAATACAAAGATTACACAGCGGAGAAGGCAAAGGAAGCGAAGGACGCTGCGGCTAGAAAAGCAGGGGAATACAAAGATTACACCGCGGAGAAGACTAGGGAAGCGACAGAATCGGCGAAGGGGAAGGCCGGTGAGTACAAAGATTTCGCGGCAGAGAAGGCGAATGAAACGAAGGAGAAGGCAGCAGAGTACAAGGATTACACGGAGGAGAAGGCGAAGGAGACGAAGGATGCAGCGGCAAGGAAGGCAGGGGAATACAGAGACTATACAGCGGAGAAAGCGAGAGAGACATCGGAGTACACGGCGGAGAAGGCTAAAGAAGGAAAGGACACTACAGTAAGCAAACTCGGGGAATTGAGAGATTCAGCGGCGGATGCTGCAAAGAGAGCCATGGAGTACTTATCTGGAAAGAAAGAGGAAGCCAAGGAGAAATCTTTCGAGACTAAAGAAGCCGCCAAGGAAAAGATGGGCGAATCGGAGGAGGCCGCGAGGAGGAAGATGGAGGAGCTGAGGCTGCAGGGAGGAGGGAGCGACAGAGAAGAAGCAAAAGTGACATTAGAGCGTAATAGAGGCAGTGGCGGGAAGGGGGGAGACACGGTGGTGGTAGGGATGGAGGAGACAAGGCCGGGGGCGCTGGCCTCGACTTTGAAGCAGGCGGACGACATGGCGGGGCAGACTTTCAACGACGTTGGTCGAATGGACGAGGATCGTTCGAAGGATCGTCAGGGAAAAATGACTGAGCTGTGTCGCTTCAGTGGCTCCAAGATATACCCAGGGAGGGGCATCAGATTTATCCGGGCTGATTCTCAGGATATTGCTCAAGAGGCGGTGAAGAAGAGGAGACGTACCACCAGGAAGCCATACTCTAGGTCCATTGTTGGTGCAACTTTGGAAGTCATCCAGAAGAAGAGAGCCGAAAAGCCAGAAGTGCGTGATGCTGCCAGAGAAGCTGCTCTGCGGGAAATTAAGGAAAGAATCAAGAAAACAAAGGACGAAAAGAAGGCCAAGAAAGCGGAAGTGTTAGCCAAGTCCCAGAAGGCGCCAGGTAAGGGTAACGTTGCCAAGGGACCTGCATCCAAAGGTCCAAAGCTCGGTGGTGGCGGTGGGAAGCGTTGA | 1782 | 55.05 | MASKEMKKERAEVAARLAASDLRDINRDEEQHAAAPGTEKKATVEVVETDRAAAHDQQQRSGVIGSVLKAVQDTYEHAKEAVVGKSQEAEERGQEVKDASAEKARETTEEAKRKMDEYGSAAAEKARETKEATGDTVASARGKMSEYGEKTKDKTGEYTDYAADKARETKDAAARKAGEYKDYTAEKTTEATESAKGKAGEYKDYAAEKAREAKDAAARKAGEYKDYTAEKAKEAKDAAARKAGEYKDYTAEKTREATESAKGKAGEYKDFAAEKANETKEKAAEYKDYTEEKAKETKDAAARKAGEYRDYTAEKARETSEYTAEKAKEGKDTTVSKLGELRDSAADAAKRAMEYLSGKKEEAKEKSFETKEAAKEKMGESEEAARRKMEELRLQGGGSDREEAKVTLERNRGSGGKGGDTVVVGMEETRPGALASTLKQADDMAGQTFNDVGRMDEDRSKDRQGKMTELCRFSGSKIYPGRGIRFIRADSQDIAQEAVKKRRRTTRKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVLAKSQKAPGKGNVAKGPASKGPKLGGGGGKR | 593 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1108259 | 1112135 | + | Cp4.1LG03g01320.1 | Cpe03g00222 | 465939 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00222 | 593 | MobiDBLite | consensus disorder prediction | 20 | 36 | - | - | |
Cpe03g00222 | 593 | Gene3D | - | 504 | 566 | - | - | |
Cpe03g00222 | 593 | MobiDBLite | consensus disorder prediction | 360 | 410 | - | - | |
Cpe03g00222 | 593 | Gene3D | - | 93 | 147 | - | - | |
Cpe03g00222 | 593 | Gene3D | - | 286 | 333 | - | - | |
Cpe03g00222 | 593 | Gene3D | - | 220 | 285 | - | - | |
Cpe03g00222 | 593 | Gene3D | - | 148 | 199 | - | - | |
Cpe03g00222 | 593 | MobiDBLite | consensus disorder prediction | 288 | 342 | - | - | |
Cpe03g00222 | 593 | Coils | Coil | 346 | 366 | - | - | |
Cpe03g00222 | 593 | Gene3D | Ribosomal protein L24e | 467 | 503 | IPR038630 | - | |
Cpe03g00222 | 593 | PANTHER | EMBRYONIC PROTEIN DC-8-LIKE | 261 | 319 | - | - | |
Cpe03g00222 | 593 | PANTHER | EMBRYONIC PROTEIN DC-8-LIKE | 310 | 460 | - | - | |
Cpe03g00222 | 593 | Coils | Coil | 371 | 395 | - | - | |
Cpe03g00222 | 593 | MobiDBLite | consensus disorder prediction | 548 | 593 | - | - | |
Cpe03g00222 | 593 | Pfam | Late embryogenesis abundant protein | 205 | 246 | IPR004238 | - | |
Cpe03g00222 | 593 | Pfam | Late embryogenesis abundant protein | 143 | 180 | IPR004238 | - | |
Cpe03g00222 | 593 | Pfam | Late embryogenesis abundant protein | 225 | 257 | IPR004238 | - | |
Cpe03g00222 | 593 | Pfam | Late embryogenesis abundant protein | 287 | 319 | IPR004238 | - | |
Cpe03g00222 | 593 | Pfam | Late embryogenesis abundant protein | 247 | 285 | IPR004238 | - | |
Cpe03g00222 | 593 | Pfam | Late embryogenesis abundant protein | 181 | 224 | IPR004238 | - | |
Cpe03g00222 | 593 | Pfam | Late embryogenesis abundant protein | 321 | 352 | IPR004238 | - | |
Cpe03g00222 | 593 | PANTHER | EMBRYONIC PROTEIN DC-8-LIKE | 1 | 261 | - | - | |
Cpe03g00222 | 593 | Coils | Coil | 541 | 565 | - | - | |
Cpe03g00222 | 593 | MobiDBLite | consensus disorder prediction | 20 | 43 | - | - | |
Cpe03g00222 | 593 | MobiDBLite | consensus disorder prediction | 81 | 134 | - | - | |
Cpe03g00222 | 593 | PANTHER | DAUER UP-REGULATED-RELATED | 261 | 319 | - | - | |
Cpe03g00222 | 593 | PANTHER | DAUER UP-REGULATED-RELATED | 310 | 460 | - | - | |
Cpe03g00222 | 593 | PANTHER | DAUER UP-REGULATED-RELATED | 1 | 261 | - | - | |
Cpe03g00222 | 593 | Pfam | Ribosomal protein L24e | 468 | 496 | IPR000988 | - | |
Cpe03g00222 | 593 | Coils | Coil | 101 | 121 | - | - | |
Cpe03g00222 | 593 | MobiDBLite | consensus disorder prediction | 81 | 151 | - | - | |
Cpe03g00222 | 593 | MobiDBLite | consensus disorder prediction | 548 | 565 | - | - | |
Cpe03g00222 | 593 | MobiDBLite | consensus disorder prediction | 360 | 423 | - | - | |
Cpe03g00222 | 593 | ProSitePatterns | Ribosomal protein L24e signature. | 473 | 490 | IPR023442 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g01301 | Cpe-Chr3:10560891 | Cpe03g00222 | Cpe-Chr3:1108259 | 1.66E-06 | transposed | |
Cpe10g00257 | Cpe-Chr10:1544459 | Cpe03g00222 | Cpe-Chr3:1108259 | 9.13E-46 | wgd | |
Cpe19g00446 | Cpe-Chr19:3965006 | Cpe03g00222 | Cpe-Chr3:1108259 | 5.59E-46 | wgd | |
Cpe03g00222 | Cpe-Chr3:1108259 | Cpe08g01058 | Cpe-Chr8:8069854 | 1.21E-49 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00222 | - | - | cmo:103486554 | 541.191 |