Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00224 ATGGGGGCCTTGCTCTCGTACTTGGCTGAAGTTGCCAATGGCTCCACCAACGATCCTGGCCTCGGAGACATACCCGAGAGTTGCGTCGCCTGTGTTTTTCTTTACCTGACTCCGCCACAGATTTGCAACCTTGCGCGGCTTAACAGAGCGTTTCGCGGCGCCGCCTCGTCGGATTCCGTTTGGCAATCAAAATTGCCTTCAAATTATCAAGATCTTCTCGATTTGCTGCCCCCCCAACGGTATCAAAATCTGTCAAAAAAGGACATATACGCACTGCTATCTCGGCCCGTGCCATTCGATGATGGAAATAAGGTGGAGGTGTGGCTGGACAGAATCACGGGAAAGATTTGCATGTCAATATCAGCGAAGGCCATGTCTATAACTGGAATTGATGATAGAAGATACTGGAATTGGATTTCGACTGAAGAGTCTCGGTTCAATGTTGTGGCATATCTGCAGCAAATTTGGTGGTTTGAAGTAGATGGGATGGTGAAATTCCCTTTTCCTGCTGATATCTATACACTGACCTTCAGGCTTCACCTTGGAAGGTTCTACAAGCGGCTCGGCCGACGTGGATGCAGCTTCGAGCATACTCACGGTTGGGATGTAAAGCCTGTACGGTTCGAAATGTCTACTTCTGATGGACAGCAAGCGGCACATGAATTCTGTTTAGACGAGAACAGATTTATTGATGTAAGTGAACACCACAAGCGTGGGTGTTGGATTGAATACAAGGTAGGTGAATTCTTTGTCAACGAGTCGGGATCGACCACGGAAATTAGATTTTCCATGAAACAGATTGACTGCACGCATTCTAAAGGTGGGGTTTGTGTAGATTCTGTATTTATCGTTCCCAGTAACTTGAAAGAGCGTAAAACATGA 882 46.83 MGALLSYLAEVANGSTNDPGLGDIPESCVACVFLYLTPPQICNLARLNRAFRGAASSDSVWQSKLPSNYQDLLDLLPPQRYQNLSKKDIYALLSRPVPFDDGNKVEVWLDRITGKICMSISAKAMSITGIDDRRYWNWISTEESRFNVVAYLQQIWWFEVDGMVKFPFPADIYTLTFRLHLGRFYKRLGRRGCSFEHTHGWDVKPVRFEMSTSDGQQAAHEFCLDENRFIDVSEHHKRGCWIEYKVGEFFVNESGSTTEIRFSMKQIDCTHSKGGVCVDSVFIVPSNLKERKT 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1119044 1125029 - Cp4.1LG03g01200.1 Cpe03g00224 465941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00224 293 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Cpe03g00224 293 PANTHER F-BOX PROTEIN PP2-A15 1 290 - -
Cpe03g00224 293 SUPERFAMILY F-box domain 8 90 IPR036047 GO:0005515
Cpe03g00224 293 Gene3D - 5 97 - -
Cpe03g00224 293 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 290 - -
Cpe03g00224 293 Pfam Phloem protein 2 115 285 IPR025886 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00224 Cpe08g01056 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00224 Cpe-Chr3:1119044 Cpe14g00826 Cpe-Chr14:6689603 2.84E-102 dispersed
Cpe03g00224 Cpe-Chr3:1119044 Cpe08g01056 Cpe-Chr8:8056744 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00224 - - cmax:111481703 603.979