Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00225 ATGGAACCCAATAGTTTAGGCGGCGGCGGCGGTGCTAGTGGAGGGATGTTTCCCGGCATAAGTTCGTCAATGCTGGGATTGGAATTGCCACTTCATCAAAACCCCTCAAATCCTCACCAATTACACCACCCCCCAATGGTGTCATATGCTCCACACGAGGCCCACCACCAACAACAACCGCCGCCGGCCGCAGTGAAATCCCCATACCCGGCGAAGCCTAAGCCGCAGCAGTCGAATGTCAGCGACGAGGAGGAGCAGGGGTTAGCGGACGACAGCAACAGCGACGCCAAGAAGAAAATCTCGCCGTGGCAGAGGATGAAATGGACGGACATGATGGTCCGGCTGCTGATCACGGCGGTGTTCTATATCGGCGACGAAGGTGGGTCGGAGCCGATGGACCATGCCAGCAAGAAAAAACCAGTGGGGCTTCTGCAAAAGAAGGGGAAATGGAAATCCGTATCCAGAGCAATGATGGAAAAAGGATTCTACGTTTCACCGCAGCAATGCGAAGACAAATTTAACGATTTAAATAAAAGATACAAACGAGTTAACGACATTTTGGGGAAGGGCACAGCCTGCAGAGTCGTCGAGAATCACACCCTATTGGAATCAATGGAATTAACACCGAAAGTGAAAGAAGAAGTCCGAAAATTACTCAATTCTAAACATCTTTTCTTCAGAGAAATGTGCGCTTACCACAACACTTGCCGTCATGGCGCCGGCAACAGCGGCGGCAACGGTGCCAATACCTCACCGGAGGCGGGGGCAGAACCATCCCACCTTCCACAACAACAACAACAGCAACGATGCTTCCACGCGACAGAGACCGCTCCTGCCGCCACGGCCGGCGAGGGTTCGAAAAGCGGAGATGAGGAAGAGGAAGACGAGGATGAGGATGATGAATCGGAAGAAGAAGATGAGGAGGAGGAGGAGGAGGATATTGAAGGAAGTTCGAGAGTACAGGAAGAGGAGGAGGAAACGGAATCGAAGAAGAGGGGGAGAAAAGAAGGATTCACAGCAGGGATTCAACAGATGAGTGCGGAGGTGATGGGAGTTGTGCAGGACGGGGGGAGGAGCCCGTGGGAGAAAAAGCAGTGGATGAAGAGGCGATTGATTCAGCTAGAAGAGCAGCAAGTGAAATACCAATCGCAGGGCTTAGAGATTGAGAAACAGAGACTGAAATGGCTGAAGTTTAGGAGGAAGAAGGAGAGGGATATGGAGAGAGCGAAGCTGGAGAACGAAAAGAGAAGGCTGGAAAACGAGAGGATGATGCTGATGGTGAAGCAGAAGGAACTCGATTTGACGGATCTGCACAATTATCAGCAGCAGCAGCAGCAGCATTCCTCGAACAGGCGAGGTGATCCATCTTCGATCACAGGTTGA 1383 51.84 MEPNSLGGGGGASGGMFPGISSSMLGLELPLHQNPSNPHQLHHPPMVSYAPHEAHHQQQPPPAAVKSPYPAKPKPQQSNVSDEEEQGLADDSNSDAKKKISPWQRMKWTDMMVRLLITAVFYIGDEGGSEPMDHASKKKPVGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENHTLLESMELTPKVKEEVRKLLNSKHLFFREMCAYHNTCRHGAGNSGGNGANTSPEAGAEPSHLPQQQQQQRCFHATETAPAATAGEGSKSGDEEEEDEDEDDESEEEDEEEEEEDIEGSSRVQEEEEETESKKRGRKEGFTAGIQQMSAEVMGVVQDGGRSPWEKKQWMKRRLIQLEEQQVKYQSQGLEIEKQRLKWLKFRRKKERDMERAKLENEKRRLENERMMLMVKQKELDLTDLHNYQQQQQQHSSNRRGDPSSITG 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1123388 1124770 + Cp4.1LG03g01270.1 Cpe03g00225 465942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00225 460 MobiDBLite consensus disorder prediction 1 99 - -
Cpe03g00225 460 MobiDBLite consensus disorder prediction 434 460 - -
Cpe03g00225 460 Gene3D - 108 182 - -
Cpe03g00225 460 Pfam Myb/SANT-like DNA-binding domain 105 231 IPR044822 -
Cpe03g00225 460 MobiDBLite consensus disorder prediction 323 337 - -
Cpe03g00225 460 MobiDBLite consensus disorder prediction 27 41 - -
Cpe03g00225 460 MobiDBLite consensus disorder prediction 288 322 - -
Cpe03g00225 460 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 14 457 - -
Cpe03g00225 460 MobiDBLite consensus disorder prediction 242 343 - -
Cpe03g00225 460 MobiDBLite consensus disorder prediction 436 460 - -
Cpe03g00225 460 MobiDBLite consensus disorder prediction 242 274 - -
Cpe03g00225 460 PANTHER F16F4.11 PROTEIN-RELATED 14 457 - -
Cpe03g00225 460 Coils Coil 292 312 - -
Cpe03g00225 460 Coils Coil 399 431 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00225 Cpe08g01055 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00877 Cpe-Chr2:6164890 Cpe03g00225 Cpe-Chr3:1123388 3.54E-09 dispersed
Cpe03g00225 Cpe-Chr3:1123388 Cpe13g00682 Cpe-Chr13:6381999 8.60E-84 dispersed
Cpe03g00225 Cpe-Chr3:1123388 Cpe08g01055 Cpe-Chr8:8051528 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49148 PF13837 Myb_DNA-bind_4 4.40E-21 CL0123 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00225 - - cmax:111498678 624.78