Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00227 ATGCCGGTGAAGATTTGCAGTTTCGCCGTCGCCCTCTTGCTCTCTCTTACCCTTTTGGCCTCTGCTTCTCTCTCTTTGGACGACGGCGACGACACCTCTGCTCTTACTCGCTTCCGTCTTCAAGCTGATTCTCACGGCGGCCTTCTAAGAAATTGGACTGGTTCTGATGCTTGTGCTTCTTCATGGCGTGGAGTTCAATGCTCTGTTAATGGCCGTGTTGTTGCTCTTTCTCTTCCTTCTATGAACTTACGAGGCCCCATTGAGTCTCTTGCGCCGCTCCACCAGCTCCGCCTTCTCGACCTCCACGACAACCGTTTGAATGGTACCATTTCGCCGCTTCTGAACTGCACGAATCTCAAGCTGTTGTATCTCTCTGGCAACGACTTCTCCGGCGAGATTCCGCCGGAGATCTCTTCTCTACGGCGACTCCTAAGGCTAGATTTGTCAGATAACAACATCCGCGGCGGAATCCCGGAGGATCTCGCTAAATTGTCCCGGCTTCTTACACTCCGTTTGCAGAACAATGTTCTCTCCGGTACGGTGCCGGATTTCTCTGTTTCGCTTGTGAATCTCACTGAACTTAATTTAACAAACAATGAACTGTCCGACCGGTTGCCGGACGGGATGATGAAGAAATTCGGCGAGAAGAGTTTCACTGGAAACGAAGGGATTTGTGGATCGAGTCCGTTACCGATCTGTTCGGTTACTGGTTCACCGCCGGGGATGGATTCTAGCAGAACGGTACCTTCAAATCCAAGCTCATTGCCGCAAAACCCTATCATCAGTTCATATAATAAAGAATCGCGAAAAGGGCTTAGCCCTGGCGCGATTGTCGCGATTGTGATCGCAAATTGCGTAGCGTTGCTTGTAATCATCTCGTTTATTGTAGCGTATTACTGCGCTCGTGATCGTGACCGGAGTTCAAGCTCCATGGCCGGAAGCGAGAGCGGTAAGAGAAGGAAGAGCGGAAGTAGCTACGGCAGCGAGAAGAAGGTGTACGCCAACGGCGGCGGCGACAGTGATGGCACTAACGCTACAGACAGAAGCAAATTGGTATTCTTCGATTGGAAGAAGCAATTCGAGCTTGAAGATTTGTTGAGAGCGTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGGACTGTTTACAGGGCGGTGCTGGACGACGGTTGTACGGTGGCGGTGAAGAGATTGAAGGATGCAAACCCATGTCCGAGGAAGGATTTTGAACAGTATATGGATGTAATTGGGAAGCTTAAACATCCAAATATTGTTAGATTGAGAGCTTTTTACTACGCTAAAGAAGAAAAGCTTCTGGTTTATGAATATCTTCCAAATGGGAGTCTTCATAATCTTCTCCATGGGAATCGAGGGCCAGGGAGGATTCCATTGGATTGGACGACCAGGATCAGTTTAGTTCTTGGAGCTGCTCGTGGGCTAGCAGCCATCCATGGAGAATACAACGCTTCAAACATTCCCCATGGCAATGTCAAATCTTCCAATGTTCTTCTCGACAAAAATGGAGTTGCTTGCATTTCCGATTTCGGGTTGTCTCTTCTTCTCAATCCCGAAGAGTGGACGGCTGAGGTGTTTGATCCGGAGCTATTGAGGTATAAGAACATTGAGGAGGAGCTTGTGTCTATGCTTCATGTGGGGTTGGCTTGTGTTCTTCCTCAGCCTGAGAAGAGACCAACAATGGCGGAAGTGACGAAGATGATCGAAGATATTAGGGTCGAGCAGTCCCCGCTCGGAGAAGACTACGACGAATCGCGTAACTCGCTTTCGCCTTCCATTGCCACCACAGAAGATGGTATGGCGTAG 1818 49.56 MPVKICSFAVALLLSLTLLASASLSLDDGDDTSALTRFRLQADSHGGLLRNWTGSDACASSWRGVQCSVNGRVVALSLPSMNLRGPIESLAPLHQLRLLDLHDNRLNGTISPLLNCTNLKLLYLSGNDFSGEIPPEISSLRRLLRLDLSDNNIRGGIPEDLAKLSRLLTLRLQNNVLSGTVPDFSVSLVNLTELNLTNNELSDRLPDGMMKKFGEKSFTGNEGICGSSPLPICSVTGSPPGMDSSRTVPSNPSSLPQNPIISSYNKESRKGLSPGAIVAIVIANCVALLVIISFIVAYYCARDRDRSSSSMAGSESGKRRKSGSSYGSEKKVYANGGGDSDGTNATDRSKLVFFDWKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCPRKDFEQYMDVIGKLKHPNIVRLRAFYYAKEEKLLVYEYLPNGSLHNLLHGNRGPGRIPLDWTTRISLVLGAARGLAAIHGEYNASNIPHGNVKSSNVLLDKNGVACISDFGLSLLLNPEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVLPQPEKRPTMAEVTKMIEDIRVEQSPLGEDYDESRNSLSPSIATTEDGMA 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1131574 1134046 - Cp4.1LG03g01230.1 Cpe03g00227 465944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00227 605 MobiDBLite consensus disorder prediction 579 605 - -
Cpe03g00227 605 Gene3D Ribonuclease Inhibitor 25 111 IPR032675 -
Cpe03g00227 605 Pfam Protein kinase domain 371 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00227 605 SUPERFAMILY L domain-like 30 209 - -
Cpe03g00227 605 ProSiteProfiles Protein kinase domain profile. 367 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00227 605 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515
Cpe03g00227 605 MobiDBLite consensus disorder prediction 236 262 - -
Cpe03g00227 605 Gene3D Phosphorylase Kinase; domain 1 340 442 - -
Cpe03g00227 605 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 523 - -
Cpe03g00227 605 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 523 596 - -
Cpe03g00227 605 MobiDBLite consensus disorder prediction 307 341 - -
Cpe03g00227 605 ProSiteProfiles Leucine-rich repeat profile. 95 117 IPR001611 GO:0005515
Cpe03g00227 605 PANTHER LRR RECEPTOR-LIKE KINASE 523 596 - -
Cpe03g00227 605 PANTHER LRR RECEPTOR-LIKE KINASE 5 523 - -
Cpe03g00227 605 SUPERFAMILY Protein kinase-like (PK-like) 371 572 IPR011009 -
Cpe03g00227 605 Gene3D Transferase(Phosphotransferase) domain 1 525 594 - -
Cpe03g00227 605 Gene3D Transferase(Phosphotransferase) domain 1 443 524 - -
Cpe03g00227 605 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Cpe03g00227 605 Gene3D Ribonuclease Inhibitor 112 234 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00227 Cpe08g01053 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00227 Cpe-Chr3:1131574 Cpe09g00316 Cpe-Chr9:1877589 1.30E-144 dispersed
Cpe03g00227 Cpe-Chr3:1131574 Cpe08g01053 Cpe-Chr8:8040718 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62270 PF00069 Pkinase 1.10E-24 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00227 - - bhj:120091526 841.262