Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00228 ATGGAGATAGAAATTGCAGCGGTTATTTTAGTGTCTTTTCTGTGGGGTTTATGGGTGTGGCGCCGCCGTGGAGCGGCAGCGCTGGGTGAGCAGCTTCCACCAGGGCCACCGCGTTGGCCAGTGGTCGGAAACTTGCTCCAACTCAGTTTTTCCGCTCACGAATCCTTCACAAAACTCGCCGCTAAGTACGGCCCAATCATGACCCTCCAACTCGGGTCCATGAAAACAGTGGTCGTCTCATCGAGCACCATAGCACGAGAGATGTTCAAAAACCACGACGCGCCGCTGTCGGGGCGTATGATTTACGAGGCAATGAAAGGGGACCACGGCACAGAAGGTTCCCTAATCACCTCCCAATACGGATCCCACTGGCGAATGCTGAGGCGATTAGCAACGAGCGAATTCTTCGTCACTCGCCGGCTCGATGCCATGCAACACGTCCGCCGACGTTGCGTCGATGCCATGGTCCAATATGTGGAAGATGAAATAAAGGGAAGCGCGTATTGGTACGCGCCGCCGATGGACGTGGGGAAATTCTTCTTTATAATGAGCTTTAATTTAATCGGGAACCTAATATTTTCGAAAGATCTAGTGGGGCCCAATTCGAAGAGGGGGAAGGAATTCTATTACCACACGAGAAGGGTGATGGAGACGGCCGGAACGCCGAATGTGGCGGACTTTCTACGGGTATTCCGGTGGTTCGACCCGCAGGGGATTAGGAGAACGACGCAGTTTCATGTGAAGGAGGCGTTTGAAATCGCCGGCGAGTTCATAAAAGAAAGATCCATGGAGAAAGAGAAAAAAGAAGAAAGAAAAAAGGATTATTTGGATGTGCTTTTGGAGTTCCATGGCGATGGCGTTGTGGAGCCCTCCCGTTTCTCTTCTTGGATCATCAACGTTATCGTCCTGGAGATGTTCACGGCGGGGACGGACACCACCACTAGTTCACTAGAATGGGCAATGGCGGAGCTCCTCCGCAACCCGGCAGCGATGCAAAAACTTCAGGCGGAGCTACGATCCACCATACCGCCAGATGGCAAACTCGAAGAAACCCATCTGCAAAACCTCCCATATCTTGATGCCGTCGTCAAAGAAACCCTCCGCCTCCACCCACCGCTGCCGTTTCTTTTCCCGAGAATGGCAATGAAGCCCTGTAAAATCCTTGGCTACTGGATTCCGGCCGAAACCCAAGTCTTGGTCAACGTTTGGGCCATTGGCCGTGACCCCAAAAACTGGAAAGACGCCTTGGTTTTCTCGCCGGAGAGATTCTTGGAGCCGACCGGCAGCAAGGATTTTAGAGGTCAACACTTTGACTTCCTTCCGTTTGGCTCTGGCCGCCGCATGTGCCCGGCGGTGCCACTGGCATCAAGGGTTCTTCCAATGGCTCTGGGGTCGTTGATTCTGCGGTTTGATTGGGCTCTGCCGGAGGGACTTTTGCCGGAGGAGATGGACATGTCGGAGCAAATGGGAATTACTCTGAAAAAGAAAGTTCCTTTGAAGGCCATTCCGATTCCTCATAAACGTCGTTTCGTGTAA 1536 52.67 MEIEIAAVILVSFLWGLWVWRRRGAAALGEQLPPGPPRWPVVGNLLQLSFSAHESFTKLAAKYGPIMTLQLGSMKTVVVSSSTIAREMFKNHDAPLSGRMIYEAMKGDHGTEGSLITSQYGSHWRMLRRLATSEFFVTRRLDAMQHVRRRCVDAMVQYVEDEIKGSAYWYAPPMDVGKFFFIMSFNLIGNLIFSKDLVGPNSKRGKEFYYHTRRVMETAGTPNVADFLRVFRWFDPQGIRRTTQFHVKEAFEIAGEFIKERSMEKEKKEERKKDYLDVLLEFHGDGVVEPSRFSSWIINVIVLEMFTAGTDTTTSSLEWAMAELLRNPAAMQKLQAELRSTIPPDGKLEETHLQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCKILGYWIPAETQVLVNVWAIGRDPKNWKDALVFSPERFLEPTGSKDFRGQHFDFLPFGSGRRMCPAVPLASRVLPMALGSLILRFDWALPEGLLPEEMDMSEQMGITLKKKVPLKAIPIPHKRRFV 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1138490 1140788 + Cp4.1LG03g01280.1 Cpe03g00228 465945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00228 511 PANTHER CYTOCHROME P450 76A1-LIKE 1 507 - -
Cpe03g00228 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Cpe03g00228 511 PANTHER CYTOCHROME P450 FAMILY 1 1 507 - -
Cpe03g00228 511 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 Pfam Cytochrome P450 33 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 Gene3D Cytochrome P450 22 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00228 511 SUPERFAMILY Cytochrome P450 33 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00228 Cpe-Chr3:1138490 Cpe04g00104 Cpe-Chr4:938648 1.93E-90 dispersed
Cpe15g00111 Cpe-Chr15:817275 Cpe03g00228 Cpe-Chr3:1138490 2.50E-37 dispersed
Cpe03g00228 Cpe-Chr3:1138490 Cpe03g01791 Cpe-Chr3:13468487 1.27E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00228 - - csv:101222700 823.542