Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00240 | ATGGAAATGGAGAGCTCGCGGAGACCTTTCGATCGAACGAGGGAACCGGGTTTGAAGAAGCTTCGACTGGCCGATGAGGCTGACCGCGGTGGGAACATTAATGGCCGGCCGTTTCCGCAGAGACCAGTTGTTTCCGGAACCAATATCGCTCAATCCAGATTTCGAGCAAGCGATAGGGATCCGGGAAGCAGTGATTCTGGTCGAGTGGGGTATCAGCCTCAGCCGCCGCAGCATCAGGAGCTTGTGAGCCAGTACAGGACAGCCCTTGCTGAGCTGACTTTCAATTCCAAACCAATCATCACGAATTTGACCATAATCGCGGGTGAAAATCTCCAGGCTGCAAAAGCGATCTCTGCCACTATTTGTGCCAACATTCTCGAGGTTCCCACTGAGCAGAAGCTGCCATCACTTTATCTATTGGACAGTATTGTAAAGAATATTGGAAGAGATTACATAAAATACTTTGCAGCAAGACTACCGGAGGTATTTTGCAAAGCTTATAGGCAAGTCGACCCATCTGTTCATACAAGCATGAGACATCTTTTTGGCACCTGGAAAGGAGTGTTTCCTCCTCAAACTCTGCAGATTATCGAGAAAGAACTTGGTTTCGTGTCTAGCGGTAGTTCTTCTTCTGGGACCATAACCTCGAAGCCAGATTTGCAGGCACAACGTCCACCCCATAGTATCCATGTAAATCCCAAGTATATTGAGAGGCAACGCCTTCAGCAGTCAGGCAGGGTGAAAGGAATGACTAGTGATGGTACTGGCGCAACAACTGTAACTCAGGATGTCGCCCAAGCCAAAATTAGTTCTGGACGCCCGTGGGCGGACACACCAATTAAAGGGCTTGATATTCAGCGTCCACTTAGAGATGCACCAAACGATTTGGCACAAGAGAAGAACGTCGCCGCTGCATATCTAGACTATGAATGTGGTTCTGATCTTTCAAGGACATCAGGTGTTGGAAGGAGGGTCGTTGATGAAGGGCAAGACAAATCTTGGTCTTTAGCTGGAAACAATTTGGCTGAGAAATTATCTGGACAAAGAAATGGGTTCAACAACAAGCTTGGATATGAAAATTACCCTGCACCCAAGTCTGCAAACACTGGTGCACGTCTACTGCCCATGCAAAAATTTTCAAGCGGCAGCAGCAACAGAGTGTTGTCTACTAACTGGAAGAACTCTGAGGAAGAGGAGTTTATGTGGGGTGAAATGAACTCTATGTTGACAGGTCATGGTGCACCTGCCATCGCCAGTGGCACCGGGAAAGATCAATGTACTCCTGAGGATTCGGATAATTCGGGTACTGACAATAAGCCATTAAGCATACGGGATACTGGGGCAAGTGTTGATAGGGAAGCTTCCTTTGATTCACAATCATCTGAGCAGAGAGAACTAGGGGATTCTGGACAGCAAAGGTCATCAATGTGGCAGTTCCAGGAGGCAATATCTCTGGATGGGCTGAGAGGCAGGGTTCCTAGAAAGAATTCAGCTCAATCAGGAGGTTATGGTGCCACTCTAACCGCAATGTCAGGTGCTAACTCTTCTGTGGATCAAATGGGAGGACGATCACAGATCACATCATCTAATATTGGAGCTTCAGGACATGGGTTTCTGAATAAAGGAGGTTCAGGGTCCCTTGGGACTGTAGGCCATCCAAGATTTCCATCACAAAGTGTTGCATTACCATCTGGACAGCCACCCTTGAACCAGCGCCCCCCTTCACCATTAGTGGATCATGTCGCTCATAAAAAACAAAGCCATAAAACTTCATTTCCTAATCTTGACCCACGTAGAAGGCATATACGGGATGCTGCCCTTGGCCTGCATCCCAACATTCGGCCAGATAACCTTCAAAAACCACAGCCTCAGGACCTACAAGCTTCAGCTTCATCTATACCTGCTTCTCAAACCAGGCACCGGTCACTGAAACCTGAAGTCACACAGTCGGAACTTTCTAGTCAGCATGCAGTATCAATTCCGGACACCGATTTTGGACCGCCCTCATCGGCTGGGACAGTTCTAGAAGTCTTACCTGCAGAAATTTTGGGAGAGCCAAGCACTAGTAGTTTGTTGGCTGCTGTAATGAAAAGTGGAATTTTGTCCAACCATTCAATAATCAGTAGCATGCAACAGAATTTCAGCTCCCAAGATGTGGGAAATATGCAACCCCGTTCAAGCGTCAACCCTCCTCTACCAAGTCAGTCTTCTCCTGCCCATACTCAGTCTACATTCTCAGAGCCAAAGACTGTGGGCGAATCTTCATTAGGTCCTCCATCTCTTGAAAGCACATCAACGCTGGTTAAGTTATCTCAGAGTAAGGTAGAAGACACACCGTTGCCATCTGATCCACTTCCTTCTCCATCTACTATGAATAGTGCATCCACTGAAACTTCAAATGTGGTAAACGATGATTCTAGTCCAATTTCTAACCTTTTGAGCTCATTGGTTGCAAAGGGCCTCATATGTGCTTCTAAAGGAGAATTAGCAAGTAACGTTACATCCCAGATGCCTTCACAGCCTGAAAATTTGAAGTCAGGTGATGTTGTGACTTGTTCTATACCAGTTCCTTCCATCCCTATTCCCTCTTCCAGTCAATCATCTATAAGACCTGAATCACCTTCAAAAGCTGCTGCTAAGAGCTCCACTACTCCACCTCCATCTGCCACAACTGAGATAAACAACCTCATAGGCTATGAGTTTAGTTCACATGTTATTCGCAAATTTCATCCATCTGTGATCAGTGGACTCTTTGACGATATTCCATTTCAATGTAAGATCTGCGGTCTTAGACTGAAATGTGAAGAACAGTTGGATACGCACTTGTGGTGGCACATGTCAAGAACTGAGTCAAACAATTCATGTAGGGCACCAAGAAGATGGTATCCAAGTTCAGTTGATTGGGTATCTGGAAATGCTAGACTTCTACTTGACGCTGCCACTTCTCTGGACAAGTCCAGCATGATGGAAGAAGATAACGAGCCAATGGTTCCAGCAGATGAAGACCAATTTGCCTGTGTTTTATGTGGTGAGCTTTTTGAAGATTTTTATAGTCAAGAGTTGGGTAAGTGGATGTTCAAAGGAGCAATGCATATCACCATCCCATCAGTGGGTAGTGAGGTAGGAAGCACAAATGAACGAGTTGCTATAGGACCCATTGTGCACATAAGTTGCTTCACTGAAAGTTCAATACACGAGAAACGGATGTATGATGCTTCCCTGCAAAACGTAATACTGGAACTACTCTGGGGGCATCCTGCTCGTGCAATTGGCATGGGGATGCGGAAAGGGAGTATGGATATGAGTGCTTCGCTCGTGGTTAGATTGGTTGAGCAAGAGATTATAGGGAGTGGTAGCTCTAATACTGGTATTTTCTAG | 3378 | 46.15 | MEMESSRRPFDRTREPGLKKLRLADEADRGGNINGRPFPQRPVVSGTNIAQSRFRASDRDPGSSDSGRVGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATICANILEVPTEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHTSMRHLFGTWKGVFPPQTLQIIEKELGFVSSGSSSSGTITSKPDLQAQRPPHSIHVNPKYIERQRLQQSGRVKGMTSDGTGATTVTQDVAQAKISSGRPWADTPIKGLDIQRPLRDAPNDLAQEKNVAAAYLDYECGSDLSRTSGVGRRVVDEGQDKSWSLAGNNLAEKLSGQRNGFNNKLGYENYPAPKSANTGARLLPMQKFSSGSSNRVLSTNWKNSEEEEFMWGEMNSMLTGHGAPAIASGTGKDQCTPEDSDNSGTDNKPLSIRDTGASVDREASFDSQSSEQRELGDSGQQRSSMWQFQEAISLDGLRGRVPRKNSAQSGGYGATLTAMSGANSSVDQMGGRSQITSSNIGASGHGFLNKGGSGSLGTVGHPRFPSQSVALPSGQPPLNQRPPSPLVDHVAHKKQSHKTSFPNLDPRRRHIRDAALGLHPNIRPDNLQKPQPQDLQASASSIPASQTRHRSLKPEVTQSELSSQHAVSIPDTDFGPPSSAGTVLEVLPAEILGEPSTSSLLAAVMKSGILSNHSIISSMQQNFSSQDVGNMQPRSSVNPPLPSQSSPAHTQSTFSEPKTVGESSLGPPSLESTSTLVKLSQSKVEDTPLPSDPLPSPSTMNSASTETSNVVNDDSSPISNLLSSLVAKGLICASKGELASNVTSQMPSQPENLKSGDVVTCSIPVPSIPIPSSSQSSIRPESPSKAAAKSSTTPPPSATTEINNLIGYEFSSHVIRKFHPSVISGLFDDIPFQCKICGLRLKCEEQLDTHLWWHMSRTESNNSCRAPRRWYPSSVDWVSGNARLLLDAATSLDKSSMMEEDNEPMVPADEDQFACVLCGELFEDFYSQELGKWMFKGAMHITIPSVGSEVGSTNERVAIGPIVHISCFTESSIHEKRMYDASLQNVILELLWGHPARAIGMGMRKGSMDMSASLVVRLVEQEIIGSGSSNTGIF | 1125 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1194792 | 1202310 | + | Cp4.1LG03g01150.1 | Cpe03g00240 | 465957 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00240 | 1125 | SUPERFAMILY | ENTH/VHS domain | 77 | 200 | IPR008942 | - | |
Cpe03g00240 | 1125 | Gene3D | - | 72 | 202 | IPR008942 | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 411 | 475 | - | - | |
Cpe03g00240 | 1125 | SMART | 558neu5 | 80 | 202 | IPR006569 | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 452 | 475 | - | - | |
Cpe03g00240 | 1125 | PANTHER | RNA POLYMERASE II-BINDING DOMAIN PROTEIN | 3 | 1064 | - | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 713 | 806 | - | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 542 | 667 | - | - | |
Cpe03g00240 | 1125 | Pfam | CID domain | 87 | 195 | IPR006569 | - | |
Cpe03g00240 | 1125 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 925 | 945 | IPR013087 | - | |
Cpe03g00240 | 1125 | CDD | CID_Pcf11 | 82 | 194 | - | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 860 | 889 | - | - | |
Cpe03g00240 | 1125 | ProSiteProfiles | CID domain profile. | 77 | 205 | IPR006569 | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 713 | 778 | - | - | |
Cpe03g00240 | 1125 | PANTHER | PRE-MRNA CLEAVAGE COMPLEX II | 3 | 1064 | IPR045154 | GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379 | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 578 | 607 | - | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 208 | 222 | - | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 208 | 227 | - | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 787 | 806 | - | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 617 | 660 | - | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 424 | 443 | - | - | |
Cpe03g00240 | 1125 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g00240 | Cpe08g01043 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00240 | Cpe-Chr3:1194792 | Cpe20g00378 | Cpe-Chr20:2128870 | 3.03E-34 | dispersed | |
Cpe03g00240 | Cpe-Chr3:1194792 | Cpe08g01043 | Cpe-Chr8:7981994 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00240 | K14400 | - | csv:101223169 | 1667.51 |