Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00250 ATGGACTTTGATCTGAAGAAGTGTAGAAGGCAGGCGGAGTCAGAGGAGGAGGAGGTGGTGGAAGAGCCGCAACATTCTGCTAAAATCTGTAAGTTTTTTGTCGAACAGCCTCATCGGCTGCAGCAGCAGCAGCAGCAACAGCCGTCTTCTTGCTCCTCTGTTCTTCCTCTGTTCGTTCCTGGTTCCATTAACGACTCCAAAGCTTCCAATATGTTGTCAGCATTTCCAGATTCAACGTCTTCTTCTTCTTCTTCTCATAGATTACCCAGGATGTTGGGCTATTTCAGTGTGGCTCAAAGGCACGAACTCGAGCTTCAGGCTCTCATTTTCCGATATATGTTGGCCGGCGCCGCTGTACCGCCGGAGCTTCTCCACCCCATCAAGAAAAGCCTTCTCTCCTCCACTGCCCCCTTCTTTCTTCATCATCCTCTTCAACATTTCCCCCACTATCCCACTTTATTACAAGCAGGGTATTGGGGCAGAGCCGCCATGGATCCAGAGCCAGGTCGGTGCCGGAGAACCGACGGCAAAAAATGGCGTTGCTCAAGAGACGTGGTCGCCGGGCAGAAGTACTGTGAGCGCCATATGCACCGTGGCCGTAACCGTTCAAGAAAGCCTGTGGAAACTACCACGACTAAACCCACCTCCACCACCACCACCGCCGCCGCCGCCGCCGCCGTATCCAGCGGCGGTTGTTCTCTCTGTTCTAACGCTAACCGTGTTGTTGGTGGCGGCGGTGGTCGGCCTTTTTTGACGGTGGAAAGTGGGAATTATTCTTGTGTATGTGGACAAACCCCATCCGTTGATCTTCTCCATCTCAATCAAGGAGCGTCCTCTGATTCCTTATCGGAAAATAAGAATTTTTATGAATCCCACAAAGAGGGCTCCGCCGGAGACGGAAAATCCGACGGCCACATTTTGAGGCATTTTTTCGACGATTGGCCGAGGTCCGAAAATGGTGGCTGTGGGAGCGACAACAGCAATGCCAGCCAACGAATGAATCCGACATCCCTTTCAATTTCGGTAGCTGGGAACCCACCGTCGTCATCCTCCGACGTGTCATTGAAATTGTCAACGGGAGGAGGCTCTGATCAAGGCAGTGGCGACCCCCATCTTCATCAAAATGGCAATATCGACGGGGAGCACATGCATTTGAATTGGGCTGCTGGATGGGCCGCCACACAAATGGCGTCCATGGGCGGACCGCTCGCCGAGGCGCTGCGCTCCGCCAATAAGAACTCGCTGCCCACTACTGTGTTGCATCAGTTGCAAAGAACAACCAACTCGGAAGCTACCTTTATCAGCACTTAA 1311 52.78 MDFDLKKCRRQAESEEEEVVEEPQHSAKICKFFVEQPHRLQQQQQQQPSSCSSVLPLFVPGSINDSKASNMLSAFPDSTSSSSSSHRLPRMLGYFSVAQRHELELQALIFRYMLAGAAVPPELLHPIKKSLLSSTAPFFLHHPLQHFPHYPTLLQAGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVETTTTKPTSTTTTAAAAAAVSSGGCSLCSNANRVVGGGGGRPFLTVESGNYSCVCGQTPSVDLLHLNQGASSDSLSENKNFYESHKEGSAGDGKSDGHILRHFFDDWPRSENGGCGSDNSNASQRMNPTSLSISVAGNPPSSSSDVSLKLSTGGGSDQGSGDPHLHQNGNIDGEHMHLNWAAGWAATQMASMGGPLAEALRSANKNSLPTTVLHQLQRTTNSEATFIST 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1245735 1248069 + Cp4.1LG03g01120.1 Cpe03g00250 465967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00250 436 ProSiteProfiles QLQ domain profile. 94 129 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe03g00250 436 MobiDBLite consensus disorder prediction 320 372 - -
Cpe03g00250 436 SMART QLQ_2 93 129 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe03g00250 436 PANTHER - 11 436 IPR031137 GO:0005634|GO:0006351|GO:0032502
Cpe03g00250 436 Pfam WRC 166 208 IPR014977 -
Cpe03g00250 436 MobiDBLite consensus disorder prediction 198 218 - -
Cpe03g00250 436 MobiDBLite consensus disorder prediction 317 379 - -
Cpe03g00250 436 ProSiteProfiles WRC domain profile. 165 209 IPR014977 -
Cpe03g00250 436 Pfam QLQ 95 127 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cpe03g00250 436 MobiDBLite consensus disorder prediction 1 22 - -
Cpe03g00250 436 PANTHER GROWTH-REGULATING FACTOR 3 11 436 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00250 Cpe08g01033 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00250 Cpe-Chr3:1245735 Cpe05g01193 Cpe-Chr5:8256902 5.68E-46 dispersed
Cpe03g00250 Cpe-Chr3:1245735 Cpe08g01033 Cpe-Chr8:7928427 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49154 PF08879 WRC 2.80E-22 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00250 - - cpep:111791263 796.578