Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00282 ATGGGTCACCTATCAAATGAACGAATGTATAAAGAACGGCCTAGAGATGGGAAAAATTCCAGGCAGGAAGATAACTGGACTTACAACTTCTTTACCGGTGAACGGCCTGACCACTCCTTGTTCGGCGAGGGACTTCTGGAAGTCGGCAAACTTCCACGTGCATCGGTCAGCTCCAATCACGTAGACGGGTTTCCTTCCGAGATTACAGACATGTCAGACAAACAGATGAGCAACGTGAATGTGTGCTATGGCATCAAGCATATATGCGGGGCTAAGACTTACCACATTTTTTCCAGGAGGTTCACAAGGCGTAATCCACCGGCGAAGCAACCAAGGAATCTGTTGTCGTGCTTGAGGAGTCAACGATGCCGACCTGAAAGGCCGAGAGCTCGAACCAAACCTAGGCACTGGTTCTCCGCGCCGGGGAAGCCATTTCCGATCACGACGGCCCTCCTGATGGCGCCGTATATGCCGCCATCGAAGATCTCCGGCACGCGGGATGAATCATTTGGAGGCTCCGGAAGTCTGATCGGTCTCATTTACAGTCCAATGCCCTTCACAATTACGACGATGTGGGCAAGCGCTGAAGGAGGGCCGCCGGAGGTTACTCTGGAGACTTCCATGGGTTCTTTCACCGTTGAGCTTTACTTCAAACACGCACCGAGGACATGTAGAAACTTCATTGAGCTTTCTCGGCGAGGTTATTATGACAATGTCAAATTTCACCGGATTATTAAGGATTTTATAGTGCAAGGTGGAGATCCCACAGGAACTGGACGGGGTGGGGAATCTATTTATGGTAAGAAATTTGAGGATGAAATAAAGCCAGAGTTGAAGCATACTGGAGCTGGTATTCTATCAATGGCAAACGCTGGTCCTAATACAAATGGAAGCCAATTCTTCATCACTCTTGCCCCTTGCCCATCCTTAGATGGGAAGCACTCCATCTTTGGAAGAGTTTGTAAGGGAATGGAAATAATCAAAAGGCTTGGCAGTGTACAAACTGATAACAACGATAGACCCATCCATGATGTGAAAATCCTACGGGCATCAGTTAAAGACTAA 1065 48.26 MGHLSNERMYKERPRDGKNSRQEDNWTYNFFTGERPDHSLFGEGLLEVGKLPRASVSSNHVDGFPSEITDMSDKQMSNVNVCYGIKHICGAKTYHIFSRRFTRRNPPAKQPRNLLSCLRSQRCRPERPRARTKPRHWFSAPGKPFPITTALLMAPYMPPSKISGTRDESFGGSGSLIGLIYSPMPFTITTMWASAEGGPPEVTLETSMGSFTVELYFKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGKKFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPCPSLDGKHSIFGRVCKGMEIIKRLGSVQTDNNDRPIHDVKILRASVKD 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1446526 1454764 - Cp4.1LG03g00740.1 Cpe03g00282 465999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00282 354 MobiDBLite consensus disorder prediction 1 24 - -
Cpe03g00282 354 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 205 352 IPR002130 GO:0000413|GO:0003755
Cpe03g00282 354 SUPERFAMILY Cyclophilin-like 202 352 IPR029000 -
Cpe03g00282 354 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 202 351 IPR002130 GO:0000413|GO:0003755
Cpe03g00282 354 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 236 253 IPR020892 GO:0003755|GO:0006457
Cpe03g00282 354 Gene3D - 188 354 IPR029000 -
Cpe03g00282 354 MobiDBLite consensus disorder prediction 1 22 - -
Cpe03g00282 354 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 195 353 IPR044666 -
Cpe03g00282 354 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 215 230 IPR002130 GO:0000413|GO:0003755
Cpe03g00282 354 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 312 327 IPR002130 GO:0000413|GO:0003755
Cpe03g00282 354 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 241 253 IPR002130 GO:0000413|GO:0003755
Cpe03g00282 354 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 299 311 IPR002130 GO:0000413|GO:0003755
Cpe03g00282 354 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 284 299 IPR002130 GO:0000413|GO:0003755
Cpe03g00282 354 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 1 195 353 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00282 Cpe08g00998 CCT
Cpe03g00282 Cpe08g00998 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00282 Cpe-Chr3:1446526 Cpe16g00113 Cpe-Chr16:2241725 7.15E-51 dispersed
Cpe02g01345 Cpe-Chr2:11902854 Cpe03g00282 Cpe-Chr3:1446526 1.24E-11 transposed
Cpe04g00858 Cpe-Chr4:7892184 Cpe03g00282 Cpe-Chr3:1446526 3.90E-26 transposed
Cpe03g00282 Cpe-Chr3:1446526 Cpe08g00998 Cpe-Chr8:7735065 1.83E-117 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00282 K12733 - csv:101222111 332.798