Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00369 ATGTTTTCGTGGCTGGCAAGGATGGCATCGGCTTGTTGGAAACCAGTGAGGCGGTATGCCCGTATGAACAAGGATGATGATGAAGATTGTTCTTTAGAGGACTCTTTGTTGTGGAGCAGAGACCTTGAAAATCACTCTTATGGGGATTTTTCTTTCGCTGTGGTTCAGGCGAATGAGGTAATTGAGGATTTTAGTCAGGTTGAGATTGGCCGTGATGCCACTTTCGTCGGCGTTTATGATGGCCATGGCGGCCCTGATGCTTCTCGCTTTATCTGTGATCATCTTTTCAAGAACCTAATGAAACTTGCTCAAGAAAGTGGAGACATAACTGGAGATGTTCTTCAAAGGGCATTTTTAGCAACTGAGGAAGGGTTTCTTACTCTTGTTCGTCGATCATGGGGAATAAAACCGACGATTGCAGCAATGGGATCTTGTTGTCTGGTGGGAGTTATCTGGAGAGGTACATTATACGTCGGTAACGTCGGTGATTCCCGGGCTGTTATTGGCTGTTTAGGTAAATCTAATAAGATAGTTGCAGAACAGTTGACAAGGGATCACAATGCAAGTATTGAGGAGGTTCGACAAGAGCTCAAGTCGTTGCATCCCGATGACTCGCATATCGTTGTTATGAAACACGGAGTTTGGCGTATAAAAGGCATAATTCAGGTATGA 672 44.64 MFSWLARMASACWKPVRRYARMNKDDDEDCSLEDSLLWSRDLENHSYGDFSFAVVQANEVIEDFSQVEIGRDATFVGVYDGHGGPDASRFICDHLFKNLMKLAQESGDITGDVLQRAFLATEEGFLTLVRRSWGIKPTIAAMGSCCLVGVIWRGTLYVGNVGDSRAVIGCLGKSNKIVAEQLTRDHNASIEEVRQELKSLHPDDSHIVVMKHGVWRIKGIIQV 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1980533 1981921 - Cp4.1LG03g04030.1 Cpe03g00369 466086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00369 223 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Cpe03g00369 223 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 223 - -
Cpe03g00369 223 SUPERFAMILY PP2C-like 52 220 IPR036457 -
Cpe03g00369 223 PANTHER ALPHABET, ISOFORM E-RELATED 6 223 - -
Cpe03g00369 223 Gene3D - 26 223 IPR036457 -
Cpe03g00369 223 Pfam Protein phosphatase 2C 72 221 IPR001932 -
Cpe03g00369 223 ProSiteProfiles PPM-type phosphatase domain profile. 49 223 IPR001932 -
Cpe03g00369 223 CDD PP2Cc 47 223 IPR001932 -
Cpe03g00369 223 SMART PP2C_4 43 223 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00369 Cpe-Chr3:1980533 Cpe11g00098 Cpe-Chr11:526743 2.84E-152 dispersed
Cpe03g00369 Cpe-Chr3:1980533 Cpe10g00688 Cpe-Chr10:3957063 6.99E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00369 K01102 - csv:101222146 411.764