Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00369 | ATGTTTTCGTGGCTGGCAAGGATGGCATCGGCTTGTTGGAAACCAGTGAGGCGGTATGCCCGTATGAACAAGGATGATGATGAAGATTGTTCTTTAGAGGACTCTTTGTTGTGGAGCAGAGACCTTGAAAATCACTCTTATGGGGATTTTTCTTTCGCTGTGGTTCAGGCGAATGAGGTAATTGAGGATTTTAGTCAGGTTGAGATTGGCCGTGATGCCACTTTCGTCGGCGTTTATGATGGCCATGGCGGCCCTGATGCTTCTCGCTTTATCTGTGATCATCTTTTCAAGAACCTAATGAAACTTGCTCAAGAAAGTGGAGACATAACTGGAGATGTTCTTCAAAGGGCATTTTTAGCAACTGAGGAAGGGTTTCTTACTCTTGTTCGTCGATCATGGGGAATAAAACCGACGATTGCAGCAATGGGATCTTGTTGTCTGGTGGGAGTTATCTGGAGAGGTACATTATACGTCGGTAACGTCGGTGATTCCCGGGCTGTTATTGGCTGTTTAGGTAAATCTAATAAGATAGTTGCAGAACAGTTGACAAGGGATCACAATGCAAGTATTGAGGAGGTTCGACAAGAGCTCAAGTCGTTGCATCCCGATGACTCGCATATCGTTGTTATGAAACACGGAGTTTGGCGTATAAAAGGCATAATTCAGGTATGA | 672 | 44.64 | MFSWLARMASACWKPVRRYARMNKDDDEDCSLEDSLLWSRDLENHSYGDFSFAVVQANEVIEDFSQVEIGRDATFVGVYDGHGGPDASRFICDHLFKNLMKLAQESGDITGDVLQRAFLATEEGFLTLVRRSWGIKPTIAAMGSCCLVGVIWRGTLYVGNVGDSRAVIGCLGKSNKIVAEQLTRDHNASIEEVRQELKSLHPDDSHIVVMKHGVWRIKGIIQV | 223 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1980533 | 1981921 | - | Cp4.1LG03g04030.1 | Cpe03g00369 | 466086 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00369 | 223 | ProSitePatterns | PPM-type phosphatase domain signature. | 75 | 83 | IPR000222 | GO:0043169 | |
Cpe03g00369 | 223 | PANTHER | PROTEIN PHOSPHATASE 2C 68-RELATED | 6 | 223 | - | - | |
Cpe03g00369 | 223 | SUPERFAMILY | PP2C-like | 52 | 220 | IPR036457 | - | |
Cpe03g00369 | 223 | PANTHER | ALPHABET, ISOFORM E-RELATED | 6 | 223 | - | - | |
Cpe03g00369 | 223 | Gene3D | - | 26 | 223 | IPR036457 | - | |
Cpe03g00369 | 223 | Pfam | Protein phosphatase 2C | 72 | 221 | IPR001932 | - | |
Cpe03g00369 | 223 | ProSiteProfiles | PPM-type phosphatase domain profile. | 49 | 223 | IPR001932 | - | |
Cpe03g00369 | 223 | CDD | PP2Cc | 47 | 223 | IPR001932 | - | |
Cpe03g00369 | 223 | SMART | PP2C_4 | 43 | 223 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00369 | Cpe-Chr3:1980533 | Cpe11g00098 | Cpe-Chr11:526743 | 2.84E-152 | dispersed | |
Cpe03g00369 | Cpe-Chr3:1980533 | Cpe10g00688 | Cpe-Chr10:3957063 | 6.99E-81 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00369 | K01102 | - | csv:101222146 | 411.764 |