Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00381 | ATGCTCCAACAGCGTCTGTTTGGGTATTTTAATGTCGTTTTCTATTTGACGATTCTGACATCGCTGGCTAGGGCCTTCACTAATCCGTCGGATGTTGCAGCTCTTCAGGATCTGTACAGTGCCATGAACTATCCACTAGAGCTTAAAGGATGGAGAAAAGAAGGTGGAGATCCTTGTGAGGAATCATGGACTGGAGTGTCTTGCTCCGGTTTCTCTGTAATGTACCTTAAGCTCCATGGACTAAATCTCACTGGGAATCTTGGAGGACAGCTCAACAATCTCATAAATTTGAAGCAAATGGATGTTAGCTCTAATAGACTTACGGGTGAAATTCCGCACAACTTGCCTCCTAATGCGACTCATATAAATATGGCATTCAACCGTTTAAGCAAAAATCTTCCACATACTTTATCTTACATGGGAAATCTCCGACATATAAATCTGAGCCATAATACTCTATCTGGTGTGCTTGGAAATGTGTTTGCTGGTTTACAGAATTTGAGAGAGATGGATTTATCATATAATGACTTTGCTGGAGATTTGCCAAATTCCTTCAGTTCTCTGACGAACATCACTAGACTGTTCTTGCAGCATAACCAATTCACAGGATCAGTTGCCTACTTGTCCCACCTTCCATTAATTGACTTGAACATCCAAGACAATTATTTTAATGGCATTATTCCAGACAATTTTAGAAACATTCCAAATTTGTGGATTGGGAGCAATAGGCTTCGTCCACAAGTTAATTCTCCACCCTGGGATTTTCCCCTGGGAAAAGATCCTATAGTGCAGAACATCAGTGGTCCTCCAACAACCAAGTCAAACGCCATCCAGAATTATCCCTCTCGTGGTGCCGTGAGGCATGAGAAGAGAAGGCATGAGAAGAGAAGGCATGGTTCTGGTGGAATAGGTCTCCTGGTAGGAGGAGTGACACTAGTAGTAACCTTTGCAGCTCTCTTTGTCGTATTTTCCATGAAGAAAGTTCATGAAAAGAGAATAAATTTGAAGATTACCAATACGTTACCTCGTTCTCTTTCTCTGGGCAAAGCTGAAGATGGTTCGTCAACTGCACCAGAAGAAGGCTTACAAAGCTTGCCCCTGAGTTCTCAATTCATGGGCTGTTCAAGGCCTATACCTATATTAAATCACACGAGAACCGAGAAATTTTCAGGAAGAAAAGGTTTCTCAAACAGATGTAGGCTCCCAGTGAGAACAAAAATTTACACCCTGGCAGAGGTTCAATCCACTACAAACAACTTTAGTCAAGAGAATCTTCTGGGAGAGGGATCTCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCAGTAAAAAATCTCAACATGGGAGCTCTCTCGTTTACAGAAGAAGAGCAATTTCTGGATGTGGTATGGACTGCTTCCCGTTTGGGGCACCCGAACATTGTTACGCTGCTTGGATATTGTGTAGAGCATGGACAACATATTCTCGGATATGAATACGTTCGAAATCTGTCTCTTGATGACGCTTTACACTGTGAAGCATACATGCCTCTGTCATGGACTGTCCGTCTCCAGATTGCTCTTGGAATTGCTAGGGCTTTAGATTATTTGCATACAAGTTTTTTCCCTCCATTTGCTCACTGCAGTCTGAAGGCTGCCAACATCTTACTTGATGAAGAACTGATGCCTCGTATTTGTGATTGTGGGCTGTCTGTTTTGAGGCCATTTGTGACCAATGGAGTTAAAACGAAGGCTTCTGAGATTGTCAGCGGTGACATAGGCTACCTTGCACCTGAACATGGGCAGCCAGGATTTGATAATACTAGAAGTGACGTGTATACCTTCGGAGTGTTGCTTTTGGAGCTTGTCACAGGAAGAAAACCATTTGACAATTCGAAACCGAGGGAAGAGCAATCGCTGGTGAAATGGGCTTCATCTCGGCTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAAGCATTAAAGGAACATTTTCCTCTAAGTCCCTCTCATGCTTTGTCGATATCATCTCCCTTTGTATACAGCCTGCAAAGGAATTCCGACCACCAATGTCCGAAATAGTGGAACATTTAACGAATCTTCAAAGGAAGATGGAGATGGCCGAACGTGCTGCTATAGAAGGAACTGAAGTGGATCTTTTTGAAAAATCATTTCGTTCTACCAACACTGGCTACGTAAGTTCACCAACATACAGCTATCCTTCCACCTCATTTTAG | 2232 | 42.74 | MLQQRLFGYFNVVFYLTILTSLARAFTNPSDVAALQDLYSAMNYPLELKGWRKEGGDPCEESWTGVSCSGFSVMYLKLHGLNLTGNLGGQLNNLINLKQMDVSSNRLTGEIPHNLPPNATHINMAFNRLSKNLPHTLSYMGNLRHINLSHNTLSGVLGNVFAGLQNLREMDLSYNDFAGDLPNSFSSLTNITRLFLQHNQFTGSVAYLSHLPLIDLNIQDNYFNGIIPDNFRNIPNLWIGSNRLRPQVNSPPWDFPLGKDPIVQNISGPPTTKSNAIQNYPSRGAVRHEKRRHEKRRHGSGGIGLLVGGVTLVVTFAALFVVFSMKKVHEKRINLKITNTLPRSLSLGKAEDGSSTAPEEGLQSLPLSSQFMGCSRPIPILNHTRTEKFSGRKGFSNRCRLPVRTKIYTLAEVQSTTNNFSQENLLGEGSLGAVYRAEFPDGQVLAVKNLNMGALSFTEEEQFLDVVWTASRLGHPNIVTLLGYCVEHGQHILGYEYVRNLSLDDALHCEAYMPLSWTVRLQIALGIARALDYLHTSFFPPFAHCSLKAANILLDEELMPRICDCGLSVLRPFVTNGVKTKASEIVSGDIGYLAPEHGQPGFDNTRSDVYTFGVLLLELVTGRKPFDNSKPREEQSLVKWASSRLHDNESLEQMVDPSIKGTFSSKSLSCFVDIISLCIQPAKEFRPPMSEIVEHLTNLQRKMEMAERAAIEGTEVDLFEKSFRSTNTGYVSSPTYSYPSTSF | 743 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2041342 | 2047312 | + | Cp4.1LG03g03880.1 | Cpe03g00381 | 466098 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00381 | 743 | Coils | Coil | 689 | 709 | - | - | |
Cpe03g00381 | 743 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 8 | 706 | - | - | |
Cpe03g00381 | 743 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 | 8 | 706 | - | - | |
Cpe03g00381 | 743 | Pfam | Leucine rich repeat N-terminal domain | 29 | 69 | IPR013210 | - | |
Cpe03g00381 | 743 | Gene3D | Ribonuclease Inhibitor | 27 | 257 | IPR032675 | - | |
Cpe03g00381 | 743 | SMART | LRR_typ_2 | 94 | 118 | IPR003591 | - | |
Cpe03g00381 | 743 | SMART | LRR_typ_2 | 140 | 163 | IPR003591 | - | |
Cpe03g00381 | 743 | SMART | LRR_typ_2 | 188 | 211 | IPR003591 | - | |
Cpe03g00381 | 743 | SMART | LRR_typ_2 | 164 | 187 | IPR003591 | - | |
Cpe03g00381 | 743 | Gene3D | Transferase(Phosphotransferase) domain 1 | 498 | 721 | - | - | |
Cpe03g00381 | 743 | SUPERFAMILY | Protein kinase-like (PK-like) | 396 | 697 | IPR011009 | - | |
Cpe03g00381 | 743 | ProSiteProfiles | Protein kinase domain profile. | 420 | 698 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe03g00381 | 743 | Pfam | Leucine rich repeat | 118 | 177 | IPR001611 | GO:0005515 | |
Cpe03g00381 | 743 | Pfam | Protein kinase domain | 421 | 695 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe03g00381 | 743 | Gene3D | Phosphorylase Kinase; domain 1 | 385 | 497 | - | - | |
Cpe03g00381 | 743 | SUPERFAMILY | L domain-like | 27 | 238 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00381 | Cpe-Chr3:2041342 | Cpe20g00626 | Cpe-Chr20:3917624 | 2.43E-168 | dispersed | |
Cpe03g00381 | Cpe-Chr3:2041342 | Cpe03g00382 | Cpe-Chr3:2047911 | 0 | tandem | |
Cpe03g00381 | Cpe-Chr3:2041342 | Cpe08g01391 | Cpe-Chr8:10000505 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62274 | PF00069 | Pkinase | 4.60E-33 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00381 | - | - | cpep:111791529 | 1409.82 |