Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00381 ATGCTCCAACAGCGTCTGTTTGGGTATTTTAATGTCGTTTTCTATTTGACGATTCTGACATCGCTGGCTAGGGCCTTCACTAATCCGTCGGATGTTGCAGCTCTTCAGGATCTGTACAGTGCCATGAACTATCCACTAGAGCTTAAAGGATGGAGAAAAGAAGGTGGAGATCCTTGTGAGGAATCATGGACTGGAGTGTCTTGCTCCGGTTTCTCTGTAATGTACCTTAAGCTCCATGGACTAAATCTCACTGGGAATCTTGGAGGACAGCTCAACAATCTCATAAATTTGAAGCAAATGGATGTTAGCTCTAATAGACTTACGGGTGAAATTCCGCACAACTTGCCTCCTAATGCGACTCATATAAATATGGCATTCAACCGTTTAAGCAAAAATCTTCCACATACTTTATCTTACATGGGAAATCTCCGACATATAAATCTGAGCCATAATACTCTATCTGGTGTGCTTGGAAATGTGTTTGCTGGTTTACAGAATTTGAGAGAGATGGATTTATCATATAATGACTTTGCTGGAGATTTGCCAAATTCCTTCAGTTCTCTGACGAACATCACTAGACTGTTCTTGCAGCATAACCAATTCACAGGATCAGTTGCCTACTTGTCCCACCTTCCATTAATTGACTTGAACATCCAAGACAATTATTTTAATGGCATTATTCCAGACAATTTTAGAAACATTCCAAATTTGTGGATTGGGAGCAATAGGCTTCGTCCACAAGTTAATTCTCCACCCTGGGATTTTCCCCTGGGAAAAGATCCTATAGTGCAGAACATCAGTGGTCCTCCAACAACCAAGTCAAACGCCATCCAGAATTATCCCTCTCGTGGTGCCGTGAGGCATGAGAAGAGAAGGCATGAGAAGAGAAGGCATGGTTCTGGTGGAATAGGTCTCCTGGTAGGAGGAGTGACACTAGTAGTAACCTTTGCAGCTCTCTTTGTCGTATTTTCCATGAAGAAAGTTCATGAAAAGAGAATAAATTTGAAGATTACCAATACGTTACCTCGTTCTCTTTCTCTGGGCAAAGCTGAAGATGGTTCGTCAACTGCACCAGAAGAAGGCTTACAAAGCTTGCCCCTGAGTTCTCAATTCATGGGCTGTTCAAGGCCTATACCTATATTAAATCACACGAGAACCGAGAAATTTTCAGGAAGAAAAGGTTTCTCAAACAGATGTAGGCTCCCAGTGAGAACAAAAATTTACACCCTGGCAGAGGTTCAATCCACTACAAACAACTTTAGTCAAGAGAATCTTCTGGGAGAGGGATCTCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCAGTAAAAAATCTCAACATGGGAGCTCTCTCGTTTACAGAAGAAGAGCAATTTCTGGATGTGGTATGGACTGCTTCCCGTTTGGGGCACCCGAACATTGTTACGCTGCTTGGATATTGTGTAGAGCATGGACAACATATTCTCGGATATGAATACGTTCGAAATCTGTCTCTTGATGACGCTTTACACTGTGAAGCATACATGCCTCTGTCATGGACTGTCCGTCTCCAGATTGCTCTTGGAATTGCTAGGGCTTTAGATTATTTGCATACAAGTTTTTTCCCTCCATTTGCTCACTGCAGTCTGAAGGCTGCCAACATCTTACTTGATGAAGAACTGATGCCTCGTATTTGTGATTGTGGGCTGTCTGTTTTGAGGCCATTTGTGACCAATGGAGTTAAAACGAAGGCTTCTGAGATTGTCAGCGGTGACATAGGCTACCTTGCACCTGAACATGGGCAGCCAGGATTTGATAATACTAGAAGTGACGTGTATACCTTCGGAGTGTTGCTTTTGGAGCTTGTCACAGGAAGAAAACCATTTGACAATTCGAAACCGAGGGAAGAGCAATCGCTGGTGAAATGGGCTTCATCTCGGCTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAAGCATTAAAGGAACATTTTCCTCTAAGTCCCTCTCATGCTTTGTCGATATCATCTCCCTTTGTATACAGCCTGCAAAGGAATTCCGACCACCAATGTCCGAAATAGTGGAACATTTAACGAATCTTCAAAGGAAGATGGAGATGGCCGAACGTGCTGCTATAGAAGGAACTGAAGTGGATCTTTTTGAAAAATCATTTCGTTCTACCAACACTGGCTACGTAAGTTCACCAACATACAGCTATCCTTCCACCTCATTTTAG 2232 42.74 MLQQRLFGYFNVVFYLTILTSLARAFTNPSDVAALQDLYSAMNYPLELKGWRKEGGDPCEESWTGVSCSGFSVMYLKLHGLNLTGNLGGQLNNLINLKQMDVSSNRLTGEIPHNLPPNATHINMAFNRLSKNLPHTLSYMGNLRHINLSHNTLSGVLGNVFAGLQNLREMDLSYNDFAGDLPNSFSSLTNITRLFLQHNQFTGSVAYLSHLPLIDLNIQDNYFNGIIPDNFRNIPNLWIGSNRLRPQVNSPPWDFPLGKDPIVQNISGPPTTKSNAIQNYPSRGAVRHEKRRHEKRRHGSGGIGLLVGGVTLVVTFAALFVVFSMKKVHEKRINLKITNTLPRSLSLGKAEDGSSTAPEEGLQSLPLSSQFMGCSRPIPILNHTRTEKFSGRKGFSNRCRLPVRTKIYTLAEVQSTTNNFSQENLLGEGSLGAVYRAEFPDGQVLAVKNLNMGALSFTEEEQFLDVVWTASRLGHPNIVTLLGYCVEHGQHILGYEYVRNLSLDDALHCEAYMPLSWTVRLQIALGIARALDYLHTSFFPPFAHCSLKAANILLDEELMPRICDCGLSVLRPFVTNGVKTKASEIVSGDIGYLAPEHGQPGFDNTRSDVYTFGVLLLELVTGRKPFDNSKPREEQSLVKWASSRLHDNESLEQMVDPSIKGTFSSKSLSCFVDIISLCIQPAKEFRPPMSEIVEHLTNLQRKMEMAERAAIEGTEVDLFEKSFRSTNTGYVSSPTYSYPSTSF 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2041342 2047312 + Cp4.1LG03g03880.1 Cpe03g00381 466098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00381 743 Coils Coil 689 709 - -
Cpe03g00381 743 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 706 - -
Cpe03g00381 743 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 8 706 - -
Cpe03g00381 743 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Cpe03g00381 743 Gene3D Ribonuclease Inhibitor 27 257 IPR032675 -
Cpe03g00381 743 SMART LRR_typ_2 94 118 IPR003591 -
Cpe03g00381 743 SMART LRR_typ_2 140 163 IPR003591 -
Cpe03g00381 743 SMART LRR_typ_2 188 211 IPR003591 -
Cpe03g00381 743 SMART LRR_typ_2 164 187 IPR003591 -
Cpe03g00381 743 Gene3D Transferase(Phosphotransferase) domain 1 498 721 - -
Cpe03g00381 743 SUPERFAMILY Protein kinase-like (PK-like) 396 697 IPR011009 -
Cpe03g00381 743 ProSiteProfiles Protein kinase domain profile. 420 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00381 743 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Cpe03g00381 743 Pfam Protein kinase domain 421 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00381 743 Gene3D Phosphorylase Kinase; domain 1 385 497 - -
Cpe03g00381 743 SUPERFAMILY L domain-like 27 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00381 Cpe-Chr3:2041342 Cpe20g00626 Cpe-Chr20:3917624 2.43E-168 dispersed
Cpe03g00381 Cpe-Chr3:2041342 Cpe03g00382 Cpe-Chr3:2047911 0 tandem
Cpe03g00381 Cpe-Chr3:2041342 Cpe08g01391 Cpe-Chr8:10000505 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62274 PF00069 Pkinase 4.60E-33 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00381 - - cpep:111791529 1409.82