Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00382 ATGATTTTAGCTCTTCTCAATCTGTATAGTACCCTAAACTACCCACCTGAGCTTAAAGGATGGAGAACAAATGGTGGGGATCCTTGCGGTGGAACGTGGACTGGGGTGGATGCTAGCTGCAATAAAATTCTGGGTGAAATTCCTTCCGGGTTACCCCCGAATGTCACTTATATGAATCTAAGCCATAATGTGCTATCTGGCCCCATTGCAAATGTTTTTTCTGGCCTACAAAATCTTGTGGAGATGGATCTGTCATATAACAACTTCACTGGAGATTTATCAAATTCATTTGCTGCTCTGACTAATATCAATAGACTGTGGCATACTAGGTTCTTGCAGGAAAACAAATTCACAGGATCGGTTTCCTACTTATCTCATCTTCCATTAACTGATTTGATTGGGGGAAATGGGTTCGATGTAAGTAAATCTCCACCCTGCGATTTTTCCTTGGAAAAAGCACCTTTGACGTACAACAATAGCAGGCCTCCATTAACTGAGTCAATTATCATCGAGAAATGTCCCTACAAGAAAAAGGTTGGGAAAAAGGGGGGGAAATTAGGTCCTGGTGGAATAGCTATAGTGGCTGGTGGAGGTGGTGTTGTGATAATCCTTGCAGCTCTATTTATTGCAATCTGCAAGACTCAAATATGTGCAAAGAAAGGGAGCATGAAGCACGTAAACATGTCTCTTCCAATCAGCACAGCTGCAGTTATTCCACCAGATGATAGTCCAAATATCTTGCCTGTCGGTTCTCCAGTCATAGGTGGCGGTCCAAATCGTGCCTGTTCTACTCGTCATGCCAGAACTGAGAGGGCATATGGCAGAAGAAGTTTCTCTAGGAGATCCAGGTTCCCAGTGAAAACAAAAACTTACACCGTGACTGAGCTTGAGTCTGCTACTAACAAGTACAGTGAAGAAAACCTTCTTGGAGAGGGATCTCTTGGTTCTGTCTATAAAGCTGAATTTCCCGATGGCCAAATTTTGGCTGTGAAAATGGTTGATATGGCAGCACTCTCTTTCACAGAAGAACAACAGTTTTTGGATGTGGTCTGCACTATTACTCGTCTGAGGCATCCTAACATTGTTAGCCTTCTTGGATATAGTGTAGAGAACGGGCAACATCTACTAGCCTATGAGTATGTCGGGAATCTGTCTCTTGATGATGCTCTGCACAGCGTCGGACAAAACCCTCTATCGTGGAGTGTTCGACTCCAAATTGCTCATGGAGTTGCCAAGGCTTTGGATTACTTGCATAATGCTTTTTTCCCCCCATTGTCGCACTTCAATTTGAAGGCCGCCAACATCATGCTTGATGAAGAATTAATGCCGAAGATTTGTGACTGTGGTTTGTCTGTTTTGAAGCCTCTTGCTGCTCAAATAGCTATTGCTGGCACTGGCTACTTTGCACCTGAATATGGCCAGTCTGGGATTGATTATACCAAAAGTGATGTGTATGCATTCGGTGTATTGCTTTTGGAGCTTATTACAGGAAAAAAACCTAATGATTTGAGACCAGGGATCGAGCAATCTCGGTTAAGACGGGCGTCATTTCAGCTTCACGATTGTGGGAGTCTAGACGAGATTATCGATCCTGACATTAAAGGAACAATATCCTCCAAGGTTTTCTCTCGCTATGCTGATATTATCACCCTTTGTATACAGCCTGTAACGAAGCATCGGCCTCCTATGTTCGCTATTGTCGGGTACCTGACAAGTATTCGGAGAAGGGTCGAGATGGAAAAACGTGCTGCAGTAGTAAGTAAAGCAGTTGACACCTTTGAGAAATCCTTCCATACAACCAACACAGGCTTCATGAGCTCGCCAACATATAGCTGCTCATCCATCTGA 1848 43.67 MILALLNLYSTLNYPPELKGWRTNGGDPCGGTWTGVDASCNKILGEIPSGLPPNVTYMNLSHNVLSGPIANVFSGLQNLVEMDLSYNNFTGDLSNSFAALTNINRLWHTRFLQENKFTGSVSYLSHLPLTDLIGGNGFDVSKSPPCDFSLEKAPLTYNNSRPPLTESIIIEKCPYKKKVGKKGGKLGPGGIAIVAGGGGVVIILAALFIAICKTQICAKKGSMKHVNMSLPISTAAVIPPDDSPNILPVGSPVIGGGPNRACSTRHARTERAYGRRSFSRRSRFPVKTKTYTVTELESATNKYSEENLLGEGSLGSVYKAEFPDGQILAVKMVDMAALSFTEEQQFLDVVCTITRLRHPNIVSLLGYSVENGQHLLAYEYVGNLSLDDALHSVGQNPLSWSVRLQIAHGVAKALDYLHNAFFPPLSHFNLKAANIMLDEELMPKICDCGLSVLKPLAAQIAIAGTGYFAPEYGQSGIDYTKSDVYAFGVLLLELITGKKPNDLRPGIEQSRLRRASFQLHDCGSLDEIIDPDIKGTISSKVFSRYADIITLCIQPVTKHRPPMFAIVGYLTSIRRRVEMEKRAAVVSKAVDTFEKSFHTTNTGFMSSPTYSCSSI 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2047911 2053450 + Cp4.1LG03g03890.1 Cpe03g00382 466099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00382 615 ProSiteProfiles Protein kinase domain profile. 303 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00382 615 SUPERFAMILY Protein kinase-like (PK-like) 286 594 IPR011009 -
Cpe03g00382 615 SUPERFAMILY L domain-like 6 129 - -
Cpe03g00382 615 Pfam Protein tyrosine and serine/threonine kinase 307 567 IPR001245 GO:0004672|GO:0006468
Cpe03g00382 615 Pfam Leucine rich repeat N-terminal domain 3 36 IPR013210 -
Cpe03g00382 615 Gene3D Ribonuclease Inhibitor 2 178 IPR032675 -
Cpe03g00382 615 Gene3D Transferase(Phosphotransferase) domain 1 382 596 - -
Cpe03g00382 615 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 133 588 - -
Cpe03g00382 615 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 39 132 - -
Cpe03g00382 615 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 3 37 - -
Cpe03g00382 615 PANTHER LEUCINE RICH REPEAT KINASE 2 133 588 - -
Cpe03g00382 615 PANTHER LEUCINE RICH REPEAT KINASE 2 39 132 - -
Cpe03g00382 615 PANTHER LEUCINE RICH REPEAT KINASE 2 3 37 - -
Cpe03g00382 615 Gene3D Phosphorylase Kinase; domain 1 263 380 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00382 Cpe08g01391 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00382 Cpe-Chr3:2047911 Cpe08g01391 Cpe-Chr8:10000505 0 dispersed
Cpe03g00381 Cpe-Chr3:2041342 Cpe03g00382 Cpe-Chr3:2047911 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62275 PF07714 PK_Tyr_Ser-Thr 4.20E-32 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00382 - - csv:101204436 887.871