Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00385 | ATGGAGATTGTTCATCATCATCAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAGCTTGGAACCAGGAAGAAGAACAAACTCCTTCATTATTCAGCTTCCAAAACAACAATTTTGCTGATCAATTACCCTTCTCCATGAATCTCCCATCCATTTCATCAAATTTCATAACCAAAGATGGAGGAGGTGATGATTTGGGAGAATTGGATCAAGCCCTTTTTCTGTATCTGGATGGACAAGAACCCTCTTCAACCACTACTACTCATCACCAATCACAGAACTCGAGCATGAGACCGCCGATGTTGAACATCTTCCCGTCGCAGCCGATGCATGTCGACCCGTTGCCGATAAAAGGAAGCACAGCAATGATTAACCATGGTGATTCAAAGATCAAACCATCAGAGCCGTCCAAAGAGTTGGCCAACCAAAGCAGCAATGGAGCCACCGTATCCGGACCAACCCTAACCCAAACCACGACAACCGAACCTCATCCCAAACCTCCAAAACGTGAAGCCAACAAGAAAGGGCTGACCTCAAGCTCAGACCAAGAAGCCCCCAAAACTCCAGACCCCAAGACCCTTAGAAGACTGGCTCAGAATCGAGAGGCTGCTAGAAAAAGCAGGCTGAGAAAAAAGGCGTATGTTCAGCAGCTAGAATTGAGTAGGATTAAGCTCACGCAGCTGGAACAAGAGCTACAAAGAGCAAGAACTCAGGGTATGTTTCTCGGCGGTGGCGGTGGCGGCGCCGAGCACCACCGCTTGATGTGCGAGCTCCGAGCAGCGGTGCAAGAACATCTACGGGAAAACGAATTGCGGTTGTTTGTCGATAGTTGTCTGGCTCATTACGACGAGGTTCTAAACTTGAAGATGATGGTTGCTAGGTCCGACGTCTTCCACCTTGTCTCCGGCATGTGGAAGACGCCGGCGGAGAGATGCTTCATGTGGATCGGCGACTTTAGGCCCTCCGAGCTTATTAAGATCATAATGGGTCAAGTAGAGCCATTAACAGAGCAACAACTAATGAACATTTGTGGACTGCAACAATCAACACAAGAGAGTGAGGAAGCATTGTCTCAAGGGCTTGAAGCCCTAAACCAGTCCTTATCAGACACCATCACCTCTGATTCATTGAGTACCCCTCCCAATATGGCTAACTATATGGGGCAGATGACCTTAGCCATCAACAAGCTCTCCTCTCTTGAAGCCTTTGTAAGACAGGCGGACAATTTAAGGCACCAAACGCTTCACCGGTTGCATCAAATGTTGACGACTCGTCAAGCCGCAAGGTGTTTGCTAGCCATTGCAGAGTATTTCCATCGACTTCGAGCTCTTAGTTCCTTGTGGTTGGCTCGTCCAAGGCAAGATTAA | 1380 | 47.68 | MEIVHHHQQEEEEEEEEEERRRRAWNQEEEQTPSLFSFQNNNFADQLPFSMNLPSISSNFITKDGGGDDLGELDQALFLYLDGQEPSSTTTTHHQSQNSSMRPPMLNIFPSQPMHVDPLPIKGSTAMINHGDSKIKPSEPSKELANQSSNGATVSGPTLTQTTTTEPHPKPPKREANKKGLTSSSDQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLELSRIKLTQLEQELQRARTQGMFLGGGGGGAEHHRLMCELRAAVQEHLRENELRLFVDSCLAHYDEVLNLKMMVARSDVFHLVSGMWKTPAERCFMWIGDFRPSELIKIIMGQVEPLTEQQLMNICGLQQSTQESEEALSQGLEALNQSLSDTITSDSLSTPPNMANYMGQMTLAINKLSSLEAFVRQADNLRHQTLHRLHQMLTTRQAARCLLAIAEYFHRLRALSSLWLARPRQD | 459 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2076078 | 2080404 | + | Cp4.1LG03g03830.1 | Cpe03g00385 | 466102 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00385 | 459 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 194 | 238 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe03g00385 | 459 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Cpe03g00385 | 459 | CDD | bZIP_HBP1b-like | 196 | 246 | - | - | |
Cpe03g00385 | 459 | Gene3D | - | 195 | 245 | - | - | |
Cpe03g00385 | 459 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 199 | 214 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe03g00385 | 459 | Coils | Coil | 8 | 28 | - | - | |
Cpe03g00385 | 459 | Pfam | Seed dormancy control | 259 | 333 | IPR025422 | GO:0006351|GO:0043565 | |
Cpe03g00385 | 459 | ProSiteProfiles | DOG1 domain profile. | 241 | 455 | IPR025422 | GO:0006351|GO:0043565 | |
Cpe03g00385 | 459 | PANTHER | BZIP TRANSCRIPTION FACTOR TGA10 | 254 | 458 | - | - | |
Cpe03g00385 | 459 | PANTHER | BZIP TRANSCRIPTION FACTOR TGA10 | 77 | 248 | - | - | |
Cpe03g00385 | 459 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 254 | 458 | - | - | |
Cpe03g00385 | 459 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 77 | 248 | - | - | |
Cpe03g00385 | 459 | MobiDBLite | consensus disorder prediction | 140 | 167 | - | - | |
Cpe03g00385 | 459 | MobiDBLite | consensus disorder prediction | 85 | 199 | - | - | |
Cpe03g00385 | 459 | SMART | brlzneu | 192 | 275 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe03g00385 | 459 | Pfam | bZIP transcription factor | 196 | 232 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe03g00385 | 459 | Coils | Coil | 215 | 242 | - | - | |
Cpe03g00385 | 459 | SUPERFAMILY | Leucine zipper domain | 196 | 238 | IPR046347 | GO:0003700|GO:0006355 | |
Cpe03g00385 | 459 | MobiDBLite | consensus disorder prediction | 85 | 106 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g00385 | Cpe08g01342 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00385 | Cpe-Chr3:2076078 | Cpe03g00448 | Cpe-Chr3:2531607 | 7.00E-124 | dispersed | |
Cpe03g00385 | Cpe-Chr3:2076078 | Cpe08g01336 | Cpe-Chr8:9633425 | 1.62E-27 | wgd | |
Cpe03g00385 | Cpe-Chr3:2076078 | Cpe08g01389 | Cpe-Chr8:9987368 | 6.86E-25 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49165 | PF14144 | DOG1 | 7.00E-31 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00385 | K14431 | - | csv:101204923 | 679.478 |