Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00425 ATGGCTTCTGGGGCTCGATTGCTTGTGCTGGATTTTGCCCTATCTTTTATGTGGTTATGGTCGGGGGTTTTGGTTAAGATCTTTGTTTTTGGGGTATTGGGGTTCGGAAATGATCCGATTGGCGAGGTTGTCAAGGCTTCCTTTTCGATTCTTAACATGTTCTTGTTCGCGTTCTTGGTGAAAATTTCAAAAGGGGCGGCTTACAATCCTCTTAATGTCTTGTCGGCTGCTTTTTCTGGGGGTTTCAGTGGCTTTCTCTTCACTGCTGGTGCCAGAATTCCTGCTCAGGTACTTGGAGCTGTTACTGCTGTTAGGCTGATTATCCACACATTTCCCGAAGCAGGACGAGGACCCCGTTTGAACGTTGGCATCCATCACGGTGCGTTGACGGAAGGGTTGTTAACGTTCGGTATCGTCTTCATCTCACTCGGACTTTCAAAAAAAATCCCTGGAAATTTCTTCATGAAGACTTGGATCTCAAGTGTCTCCAAGTTAACACTTCATGTTCTTGGTTCTGACTTAACTGGTGGCTGTATGAACCCCGCATCCGTAATGGGATGGGCATACGCTCGTGGGGAACATATAACGAAAGAACACATTCTTGTATACTGGATCGCTCCGATTCAAGGAACTATAGCAGCAGTATCGACGTTTAAGGTACTATTTCGAAAACCGAAAGAGGAGGAAGTAAATACAAAGAAGAAATCAGAATGA 714 45.1 MASGARLLVLDFALSFMWLWSGVLVKIFVFGVLGFGNDPIGEVVKASFSILNMFLFAFLVKISKGAAYNPLNVLSAAFSGGFSGFLFTAGARIPAQVLGAVTAVRLIIHTFPEAGRGPRLNVGIHHGALTEGLLTFGIVFISLGLSKKIPGNFFMKTWISSVSKLTLHVLGSDLTGGCMNPASVMGWAYARGEHITKEHILVYWIAPIQGTIAAVSTFKVLFRKPKEEEVNTKKKSE 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2384379 2388443 - Cp4.1LG03g04280.1 Cpe03g00425 466142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00425 237 SUPERFAMILY Aquaporin-like 6 235 IPR023271 -
Cpe03g00425 237 PANTHER AQUAPORIN SIP2-1-RELATED 4 237 - -
Cpe03g00425 237 Pfam Major intrinsic protein 55 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00425 237 Gene3D Glycerol uptake facilitator protein. 3 236 IPR023271 -
Cpe03g00425 237 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00425 237 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00425 237 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00425 237 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00425 237 PRINTS Major intrinsic protein family signature 201 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe03g00425 237 PANTHER AQUAPORIN SIP2-1-RELATED 4 237 IPR044226 GO:0015267
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00425 Cpe10g01037 CCT
Cpe03g00425 Cpe08g01357 CCT
Cpe03g00425 Cpe19g00188 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00425 Cpe-Chr3:2384379 Cpe19g00188 Cpe-Chr19:1531992 5.59E-27 dispersed
Cpe03g00425 Cpe-Chr3:2384379 Cpe08g01357 Cpe-Chr8:9764765 1.22E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00425 K09875 - csv:101214379 406.757