Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00437 ATGGGATACTTACAATCCCTTGGCTGTCTCCTTCAAAATGCAAAGCCTTACATCGTTGTCATCTCCCTCCAATTTGGCTATGCCGGAATGAATATCATCTCTGCCATCTCCCTCAACCACGGTATGAGCCATTACGTTCTCGTCGTCTACCGCCACGCCTTTGCCACTGTTGTCATGGCACCTTTTGCTCTTGTTTTTGAGAGAAAAATGAGACCCAAGATTACACTTAAGATTTTCGCTCAGCTGTTTGTTCTGGCTTTTCTTGGACCACTGATTGATCAGAACTTCTACTACTTGGGGATAAAAATGACATCCCCAACTTTTGCATGTGCCATAAGCAACACGCTTCCTTCAATGACATTCATCATGGCACTTCTTTGTAGGTATGTTAAGTTTTGGTTAACGTCCTTTCAAATCGAATAA 423 42.79 MGYLQSLGCLLQNAKPYIVVISLQFGYAGMNIISAISLNHGMSHYVLVVYRHAFATVVMAPFALVFERKMRPKITLKIFAQLFVLAFLGPLIDQNFYYLGIKMTSPTFACAISNTLPSMTFIMALLCRYVKFWLTSFQIE 140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2492246 2492864 - Cp4.1LG03g08650.1 Cpe03g00437 466154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00437 140 Pfam EamA-like transporter family 16 126 IPR000620 GO:0016020|GO:0016021
Cpe03g00437 140 PANTHER WAT1-RELATED PROTEIN 10 131 IPR030184 GO:0016021|GO:0022857
Cpe03g00437 140 PANTHER WAT1-RELATED PROTEIN 10 131 - -
Cpe03g00437 140 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 126 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00412 Cpe-Chr3:2306202 Cpe03g00437 Cpe-Chr3:2492246 9.29E-88 dispersed
Cpe03g00437 Cpe-Chr3:2492246 Cpe08g01338 Cpe-Chr8:9650478 1.55E-71 dispersed
Cpe03g00437 Cpe-Chr3:2492246 Cpe03g00439 Cpe-Chr3:2497955 2.77E-46 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00437 - - cpep:111791423 258.84