Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00438 ATGGAGGTCTGTGTTGGGACTATTTTGTTCATCACTTTTTTCTCTGTTTTCTTTTACCTTCGAAAATCACGAAGCCATGAAGGTTTTAGACTCTACCCTGTTGTCGGAGTTCTGCCGCTGTTCTTATTGAACCGGCACCGTTTTCTGGACTGGACGACGGAGGTCCTCCGCAACAGTCGGAACAACACGGCGGTATTCCGCCGGCCAGGGGGTATCACCGGCGTCATGACGGGAAACCCAGATGTGGTGGAGCATATACTGAAGACCCAGTTTGAGAACTACTCGAAAGGGGAACGATTGGTTTCGCTTATGGAGGATTTTTTGGGGTCTGGAATTTTCAACTCCGACGGCGAAATTTGGAGGATTCAACGGAAAATGGCGAGTTATGAATTCAGCACCAAATCGCTGAGAAATTTCGTCACGGAAAATGTTGTAATTGAGATTCAAACGAAGCTGATTCCTCTGTTGGAAAAGGCTTCTGAAACAGAGCAGATTTTGGATTTTCAAGACGTTTTTGAACGATTTGCGTTTGATAATGTCTGTAAATTATCGTTCAATTTCGACCCTGGTTGTCTCGGCGGCGATGCAACTTCCGCCACCGAGTTCATGCTCGCTTTTGAGACCGCCGCCACTCTAATTTCCGGCAGAATGGAAGAGAAAACGACCGAAAACAAGGATGACAAAGATTTATTATCTCGGTTCATGGCCGACAAACAAAATTCCCCAAAATTCCTCCGAGACATAGCCATAAGCTTCATCCTCGCCGGTCGAGACACCACTTCTTCAGCTCTAACATGGTTCTTTTGGATCATATCCACCCGACCAGACATCAAACAAAAGATCCTTAAAGAACTCAAAACCATCAGGTCTAAAACTAGTAACCAAATCGGAGAAACCTTCCACATCGACGAACTCCGGGACATGCATTATCTCCAAGCAACATTGTCGGAGACACTCCGGTTATACCCACCGGTGCCGGTGGACCCAAAAGCTTGTCGAGGCGACGATGTCCTACCGGACGGGACGGTTGTCGGGAAGAATTGGTTTGTGATGTACCATGCATATGCAATGGGGAGAATGGAGAGCATTTGGGGGAAGAATTGTGAGGAGTTTTGGCCGGAAAGGTGGCTGGAAAATGGGGTTTGTAGGGGTGAGAGCCCTTTTAGGTTCCCTATATTCCATGCAGGGCCGAGGACGTGCGTGGGGAAAGACATGGCTTATGTTCAGATGAAGGCCATAGTTGCAGCTGTGATGGAGAGGTTTGAGGTCATAATCATGAAGAAGGAGACTCCAAAGCATTATCAGTCATTGACTTTGAGGATGGAGAACGGGTTGCAAGTTATGGTCGAAAAGAGGTCAATATAA 1365 47.03 MEVCVGTILFITFFSVFFYLRKSRSHEGFRLYPVVGVLPLFLLNRHRFLDWTTEVLRNSRNNTAVFRRPGGITGVMTGNPDVVEHILKTQFENYSKGERLVSLMEDFLGSGIFNSDGEIWRIQRKMASYEFSTKSLRNFVTENVVIEIQTKLIPLLEKASETEQILDFQDVFERFAFDNVCKLSFNFDPGCLGGDATSATEFMLAFETAATLISGRMEEKTTENKDDKDLLSRFMADKQNSPKFLRDIAISFILAGRDTTSSALTWFFWIISTRPDIKQKILKELKTIRSKTSNQIGETFHIDELRDMHYLQATLSETLRLYPPVPVDPKACRGDDVLPDGTVVGKNWFVMYHAYAMGRMESIWGKNCEEFWPERWLENGVCRGESPFRFPIFHAGPRTCVGKDMAYVQMKAIVAAVMERFEVIIMKKETPKHYQSLTLRMENGLQVMVEKRSI 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2495052 2497030 - Cp4.1LG03g08560.1 Cpe03g00438 466155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00438 454 PANTHER OS01G0804400 PROTEIN 17 219 - -
Cpe03g00438 454 PRINTS P450 superfamily signature 391 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 PRINTS P450 superfamily signature 255 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 PRINTS P450 superfamily signature 313 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 PANTHER CYTOCHROME P450 17 219 - -
Cpe03g00438 454 Pfam Cytochrome P450 68 196 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 Pfam Cytochrome P450 205 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 SUPERFAMILY Cytochrome P450 18 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 393 402 IPR017972 GO:0005506|GO:0016705
Cpe03g00438 454 PANTHER CYTOCHROME P450 215 450 - -
Cpe03g00438 454 PRINTS E-class P450 group I signature 244 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 PRINTS E-class P450 group I signature 400 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 PRINTS E-class P450 group I signature 264 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 PRINTS E-class P450 group I signature 312 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 PRINTS E-class P450 group I signature 390 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 Gene3D Cytochrome P450 12 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00438 454 PANTHER OS01G0804400 PROTEIN 215 450 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00411 Cpe-Chr3:2302259 Cpe03g00438 Cpe-Chr3:2495052 0 dispersed
Cpe03g00438 Cpe-Chr3:2495052 Cpe05g00048 Cpe-Chr5:255317 5.01E-129 dispersed
Cpe03g00438 Cpe-Chr3:2495052 Cpe08g01337 Cpe-Chr8:9644553 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00438 - - cmax:111482283 836.639