Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00440 ATGGTCCTCTCTCTCATCCCTCTCTCTCTCCTCCTTCTCCTCCTCGCCTACAACCTCTTCAACCGCCTCCGCTTCAAGCTTCCGCCGGGGCCACGCCCGCTTCCGGTGGTCGGAAACCTGTACGACGTGAAGCCGGTCCGGTTCCGATGCTACGCGGACTGGGCGAAGCAGTACGGTCCAATCATATCGGTGTGGTTCGGGTCGACGCTGAACGTGGTGGTGTCGAACACGGAGCTAGCGAGGGCGGTGCTGAAGGAGCACGACCAGAGCCTGGCGGACCGGCACCGGACTCGGTCGGCGGCGAAATTCAGCCGCGATGGGAAGGACCTGATTTGGGCGGACTATGGGCCCCACTATGTGAAGGTGAGGAAAGTGTGTACCATTGAACTGTTCTCACCGAAACGACTTGAATCGCTGAGGCCGATTAGAGAAGATGAAGTTTCCGCCATGGTTGAAGACATCTTCAAGCTCTGCACCAATCCTGAGAAGTCAGGCAAGAGTGTGAAGGTGAGGGAATTTCTGGGAGCGGTTTCATTCAACAACATCACCAGACTCGCATTCGGGAAGAGGTTCGTCAACTCCGATGGCGTTATGGACGAGCAGGGCCTCGAATTCAAGGCCATTGTCGCCAATGGCCTCAAGCTCGGCGCCTCCCTGGCCATGGCTGAGCACATCCCTTGGCTTCGCTGGATGTTCCCTCTCGAAGAAGAAGCCTTCGCCAAGCATGGTGCCCGTCGCGACCGCCTCACTCGAGCCATCATGGAAGAGCACACCAAAGCTCGCAACCAGAGCGGTAATGTCAAGAACCACTTCGTTGATGCTCTACTTACTCTCCAAGATAAGTATGATCTCAGTGAAGACACTATCATCGGCCTCCTTTGGGATATGATCACTGCCGGCATGGACACGACGGCGATTTCGGTGGAATGGGCGATGGCGGAGATCGTAAGGAACCCTAGAGTGCAGAAGAAGGTTCAGGAGGAACTAGACAATGTGGTTGGAGTAGATCGGATTATGACAGAGAACGACTTCTCGAACCTTCCGTATCTCCAATGCGTCGTAAAGGAGGCGATGAGATTACATCCACCAACGCCATTGATGCTGCCGCATCGATCGAACGCCAACGTGAAGATCGGCGGCTACGACATCCCCAAAGGCTCGAACGTGCATGTGAACGTGTGGGCAGTGGCACGTGACCCGGCGGTGTGGAAGAACGCAGAGGAATTCCGGCCTGAGAGGTTCTTAGAAGAGGATGTGGACATGAAAGGGCACGATCTCCGGCTGCTGCCATTCGGGGCAGGGCGGAGGGTATGCCCAGGGGCTCAATTAGGAATCAATTTGGTGACCTCAATGTTGGGGCACCTTCTGCACCATTTCGAATGGACACCGTCGCCGGGGATGAAGGCGGAGGAGATCGACATGTCGGAGAGCCCTGGATTGGTGTCGTACATGAAGACGCCAGTGCAGGCTGTGGCCACTCCCAGGCTGCCTTCGGGACTGTACAAACGCGTGCCTGTGGACATGTAA 1527 56.39 MVLSLIPLSLLLLLLAYNLFNRLRFKLPPGPRPLPVVGNLYDVKPVRFRCYADWAKQYGPIISVWFGSTLNVVVSNTELARAVLKEHDQSLADRHRTRSAAKFSRDGKDLIWADYGPHYVKVRKVCTIELFSPKRLESLRPIREDEVSAMVEDIFKLCTNPEKSGKSVKVREFLGAVSFNNITRLAFGKRFVNSDGVMDEQGLEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMEEHTKARNQSGNVKNHFVDALLTLQDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAEIVRNPRVQKKVQEELDNVVGVDRIMTENDFSNLPYLQCVVKEAMRLHPPTPLMLPHRSNANVKIGGYDIPKGSNVHVNVWAVARDPAVWKNAEEFRPERFLEEDVDMKGHDLRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFEWTPSPGMKAEEIDMSESPGLVSYMKTPVQAVATPRLPSGLYKRVPVDM 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2502016 2505348 + Cp4.1LG03g08700.1 Cpe03g00440 466157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00440 508 SUPERFAMILY Cytochrome P450 28 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 Gene3D Cytochrome P450 21 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 501 - -
Cpe03g00440 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Cpe03g00440 508 PANTHER CYTOCHROME P450 98A3 5 501 - -
Cpe03g00440 508 Pfam Cytochrome P450 28 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00440 508 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00155 Cpe-Chr2:796291 Cpe03g00440 Cpe-Chr3:2502016 2.72E-58 dispersed
Cpe03g00440 Cpe-Chr3:2502016 Cpe04g00104 Cpe-Chr4:938648 3.89E-99 dispersed
Cpe06g00136 Cpe-Chr6:721798 Cpe03g00440 Cpe-Chr3:2502016 1.52E-49 dispersed
Cpe12g00812 Cpe-Chr12:7286735 Cpe03g00440 Cpe-Chr3:2502016 5.31E-68 dispersed
Cpe20g00084 Cpe-Chr20:447622 Cpe03g00440 Cpe-Chr3:2502016 7.07E-75 dispersed
Cpe03g00440 Cpe-Chr3:2502016 Cpe03g01791 Cpe-Chr3:13468487 4.02E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00440 K09754 - csv:101217257 912.524