Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00446 ATGGGAAAGAGCGAGGAAGAACAGCCGCTGCCGGTTGGAGTGAGCTCCTCTGAGCTTTCTGATTGGACTGTACAGAGTAGATGTGGCGGCGGTGGGTGCTTTGCGATTCGTAGACTGATTGCTGTGAGATGTGTCTTCTTCCTGTTACTGTCGGCGGCTGTGTTTCTTTCTGCTCTTTTTTGGCTGCCGCCGTTCCTTTCATACGGAGATTGGCCGGATCAGGCGGCTGATTTTACTTATAGAGATCATGAAATAGTAGCGTGTTTTCGTGCTCGGAAGCCAGTTCCTTTTCTGAAAAACCATATTTTTGAGCTTGAAGATAACATTTTTGGAGAAATTCCTGTTCCTTTTGTCAAGGTGGCTGTCCTCTCGCTACAATCATTAGGCGGATCGAACGTAACAGATATCATTTTCTCCGTAGATCCTGATGCTAAGTATTCAAAAATTCCCCCAACTTCTCAAAGTTTAATCAAGGAAACGTTTGAAACATTGGTTATAAACGATCCTCCTCTCCGATTGAACGCATCGTTATTCGGCAATACTTCGTTGTTCGAGGTGTTGAAATTTCCTGGTGGGATAACCATTATTCCTCCTCAGAGTGCATTTCTTCTGCAGACAGCACAGATCTATTTCAATTTTACGTTGAATTATTCTATCTTTCAAATTCAAGTGAATTTCGATGATCTTACCAGCCAGCTGAGGTCGGGATTACGACTATCTCGTTATGAGAATTTATATGTTAGCCTATCGAACGAACGAGGTTCGACAATGCAGGCTCCTACTATTGTTCAGTCGTCTGTTCTGATGGCTATTGGGACGAATTCGTCGAATCAAAGACTCAAACAGTTGGCTCAAACCATCACGAATTCTCATTCGGGAAATCTTGGCCTGAACAACACTGTTTTTGGCAAGGTCAAGCAGGTGCGTCTTTCGTCGGTCCTAAACCACTCTCTTAGTGGCGGTCAAGCACGGTCACCTTCACCTGCTCCTCTGCCTCATCCTCACCCCCACCACCACCACCACCACCACCACCATCAACACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCATCACCATCACCATCACCACCACCAACACCACCACCAGGACGCTGCATATTCACCGAGTCCTGTAACAGAGGAGCACAAACATGCACCGAAAAATGGGATCTCATCCGCTCCTGAAGCTGGTTCATCCCCAGTGGAAAGTCCAGCTTCAAAGAAACGTAACTACAAAGCAACTCCACCTGGTTTTCGATATGGATATAAAGGGTTGTCAACAAAAGTCAGAAAACGATCTCATTTAGGCTCTATTCCGTCTCCAAGCAGCCCTCCATCGTCGCCATACTTACGAGTAGGCCTGCCAGCACCGGTCACGGTTTCCATATCTGCTTCAAGTCCACTGCCAGGGGTAGCTCTATCTAATGTACAGCCTCCAGAAAAAGGCGACAGAAGTGCCCCTTCAGTCTTGCCACCACAATTTTCTTGTGAGTATGCCATCCTTCATTCTCACATTGTTTCATAG 1539 46.85 MGKSEEEQPLPVGVSSSELSDWTVQSRCGGGGCFAIRRLIAVRCVFFLLLSAAVFLSALFWLPPFLSYGDWPDQAADFTYRDHEIVACFRARKPVPFLKNHIFELEDNIFGEIPVPFVKVAVLSLQSLGGSNVTDIIFSVDPDAKYSKIPPTSQSLIKETFETLVINDPPLRLNASLFGNTSLFEVLKFPGGITIIPPQSAFLLQTAQIYFNFTLNYSIFQIQVNFDDLTSQLRSGLRLSRYENLYVSLSNERGSTMQAPTIVQSSVLMAIGTNSSNQRLKQLAQTITNSHSGNLGLNNTVFGKVKQVRLSSVLNHSLSGGQARSPSPAPLPHPHPHHHHHHHHHQHHHHHHHHHHHHHHHHHHHHHHHQHHHQDAAYSPSPVTEEHKHAPKNGISSAPEAGSSPVESPASKKRNYKATPPGFRYGYKGLSTKVRKRSHLGSIPSPSSPPSSPYLRVGLPAPVTVSISASSPLPGVALSNVQPPEKGDRSAPSVLPPQFSCEYAILHSHIVS 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2524679 2528716 - Cp4.1LG03g08600.1 Cpe03g00446 466163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00446 512 PANTHER F20B24.21 1 491 - -
Cpe03g00446 512 MobiDBLite consensus disorder prediction 316 429 - -
Cpe03g00446 512 MobiDBLite consensus disorder prediction 333 373 - -
Cpe03g00446 512 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 491 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00446 Cpe10g01098 CCT
Cpe03g00446 Cpe19g00242 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00466 Cpe-Chr1:2680291 Cpe03g00446 Cpe-Chr3:2524679 2.38E-56 dispersed
Cpe03g00446 Cpe-Chr3:2524679 Cpe19g00242 Cpe-Chr19:1985781 9.87E-101 dispersed
Cpe03g00446 Cpe-Chr3:2524679 Cpe10g01098 Cpe-Chr10:6722216 2.45E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00446 - - cmax:111482272 856.284