Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00456 | ATGTTAATCGTGGTGGGTCATTTTTTTCCCCCTCCTCCCTTCCTCTTAAAACCAACGCAAACCCACCAATTTCCCATTCTCTCTCTCTCTCTCTCTGATTCTGAATTTGGGGCAATCATGGTTATGGCTGCCGATTCTCAGTTCCATGTGCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTCATCGAGAGGCTTCTCAAAACCTCCTCGTATCAAGTTACTACGGTTGATTCAGGGAGCAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAACATACAAACTTCAAATCTCCTTCTTCTTCTTCCTCCTCCAACATTCATCATCAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAACTTACCTTCGAGAATCAGCAGATGTTTAGAAGAAGGCGCGGAAGAATTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCACACATAATGAAGACGAAATTAAAGGATCAAAATCAAGAAGAAGAAGAAGAAACAACAGTGGCCAAATTCGAATCGGTTGAAAAACAACAACAACAACAACAACAGATTCAAATGAACAGTAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTAGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGA | 696 | 42.39 | MLIVVGHFFPPPPFLLKPTQTHQFPILSLSLSDSEFGAIMVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQHTNFKSPSSSSSSNIHHQESTSLRNIPVVIMSSENLPSRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTVAKFESVEKQQQQQQQIQMNSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN | 231 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2621577 | 2623425 | + | Cp4.1LG03g08790.1 | Cpe03g00456 | 466173 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00456 | 231 | MobiDBLite | consensus disorder prediction | 184 | 202 | - | - | |
Cpe03g00456 | 231 | ProSiteProfiles | Response regulatory domain profile. | 49 | 163 | IPR001789 | GO:0000160 | |
Cpe03g00456 | 231 | MobiDBLite | consensus disorder prediction | 184 | 231 | - | - | |
Cpe03g00456 | 231 | MobiDBLite | consensus disorder prediction | 203 | 222 | - | - | |
Cpe03g00456 | 231 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 114 | 218 | IPR045279 | GO:0009736 | |
Cpe03g00456 | 231 | Gene3D | - | 41 | 106 | - | - | |
Cpe03g00456 | 231 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR9 | 42 | 96 | - | - | |
Cpe03g00456 | 231 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 42 | 96 | IPR045279 | GO:0009736 | |
Cpe03g00456 | 231 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR9 | 114 | 218 | - | - | |
Cpe03g00456 | 231 | SUPERFAMILY | CheY-like | 47 | 158 | IPR011006 | - | |
Cpe03g00456 | 231 | Gene3D | - | 107 | 204 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00082 | Cpe-Chr1:492527 | Cpe03g00456 | Cpe-Chr3:2621577 | 3.10E-37 | dispersed | |
Cpe01g01907 | Cpe-Chr1:16277394 | Cpe03g00456 | Cpe-Chr3:2621577 | 1.26E-52 | dispersed | |
Cpe01g02057 | Cpe-Chr1:17435628 | Cpe03g00456 | Cpe-Chr3:2621577 | 3.94E-40 | dispersed | |
Cpe03g00456 | Cpe-Chr3:2621577 | Cpe19g00016 | Cpe-Chr19:135237 | 5.19E-48 | dispersed | |
Cpe03g00456 | Cpe-Chr3:2621577 | Cpe13g00476 | Cpe-Chr13:4958240 | 1.98E-53 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00456 | K14492 | - | csv:101220810 | 233.802 |