Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00456 ATGTTAATCGTGGTGGGTCATTTTTTTCCCCCTCCTCCCTTCCTCTTAAAACCAACGCAAACCCACCAATTTCCCATTCTCTCTCTCTCTCTCTCTGATTCTGAATTTGGGGCAATCATGGTTATGGCTGCCGATTCTCAGTTCCATGTGCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTCATCGAGAGGCTTCTCAAAACCTCCTCGTATCAAGTTACTACGGTTGATTCAGGGAGCAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAACATACAAACTTCAAATCTCCTTCTTCTTCTTCCTCCTCCAACATTCATCATCAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAACTTACCTTCGAGAATCAGCAGATGTTTAGAAGAAGGCGCGGAAGAATTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCACACATAATGAAGACGAAATTAAAGGATCAAAATCAAGAAGAAGAAGAAGAAACAACAGTGGCCAAATTCGAATCGGTTGAAAAACAACAACAACAACAACAACAGATTCAAATGAACAGTAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTAGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGA 696 42.39 MLIVVGHFFPPPPFLLKPTQTHQFPILSLSLSDSEFGAIMVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQHTNFKSPSSSSSSNIHHQESTSLRNIPVVIMSSENLPSRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTVAKFESVEKQQQQQQQIQMNSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2621577 2623425 + Cp4.1LG03g08790.1 Cpe03g00456 466173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00456 231 MobiDBLite consensus disorder prediction 184 202 - -
Cpe03g00456 231 ProSiteProfiles Response regulatory domain profile. 49 163 IPR001789 GO:0000160
Cpe03g00456 231 MobiDBLite consensus disorder prediction 184 231 - -
Cpe03g00456 231 MobiDBLite consensus disorder prediction 203 222 - -
Cpe03g00456 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR 114 218 IPR045279 GO:0009736
Cpe03g00456 231 Gene3D - 41 106 - -
Cpe03g00456 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9 42 96 - -
Cpe03g00456 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR 42 96 IPR045279 GO:0009736
Cpe03g00456 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9 114 218 - -
Cpe03g00456 231 SUPERFAMILY CheY-like 47 158 IPR011006 -
Cpe03g00456 231 Gene3D - 107 204 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00082 Cpe-Chr1:492527 Cpe03g00456 Cpe-Chr3:2621577 3.10E-37 dispersed
Cpe01g01907 Cpe-Chr1:16277394 Cpe03g00456 Cpe-Chr3:2621577 1.26E-52 dispersed
Cpe01g02057 Cpe-Chr1:17435628 Cpe03g00456 Cpe-Chr3:2621577 3.94E-40 dispersed
Cpe03g00456 Cpe-Chr3:2621577 Cpe19g00016 Cpe-Chr19:135237 5.19E-48 dispersed
Cpe03g00456 Cpe-Chr3:2621577 Cpe13g00476 Cpe-Chr13:4958240 1.98E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00456 K14492 - csv:101220810 233.802