Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00476 | ATGAGTATAGAGAAGTATCTTCTGAAGGACTTTGAAGTTGAGCCGAAACGTCCTTCACCGGAAGCTTTGAGGAGATGGAGATCTGCCGTCTCTATCGTAAAAAATCGACGCCGAAGGTTCCGAAATACTGCAGATCTCGACAAACGCTCCGAAGCCGAGAAAAAGAAGCTCAAAATCCAGAAGGCAGCATTACAATTTATTGATGATGAGCTTGCATCCATAGTCCGTAGCCATGATTATAAGGCATTGAAATTCCATGGTGGTGTTGAAGGACTTTCAAGGAAAGTTTCTGTCGCACTAGATGCAGGTGTTAGTGAAAAGGATGTATCGAAGAGACAAGAGATTTATGGTTATAATCGTTACACAGAGAAGCCTTCCAGATCTTTTTTGGTGTTTCTATGGGAAGCATTACATGACGTGACATTAATCATCCTAATATTCTGTGCGCTTATTTCTTTAGGCGTTGGGATTGCCACTGAAGGATGGCCTAAGGGGACCTATGATGGTTTAGGAATTCTACTCAGTATACTATTGGTCGTCTTGGTTACTTCTATTAGTGATTACAGGCAGTCTTTGCAATTCAAGGATCTTGACCGGGAAAAGCAAAAAATTGATGTTGATGTCACTAGGGATGGGCTGAGGAAAAAAGTTTCCATTTATGACTTGGTTGTTGGAGATATTGTTCATCTATCCATTGGGAATCAGGTTCCTGCTGATGGGGTTTTCATATCAGGATACAGTCTGCTAATTGATGAATCCAGTTTATCTGGTGAGAGTGAACCAGTGAACATAGGTGTGGAAAAACCGTTTCTTCTTTCAGGAACCAAAGTGCAAGATGGATCTGGAAAGATGTTGGTAACAACAGTTGGCATGAAAACTGAATGGGGAAAACTAATGGAAACTCTCAGCGAGGGAGGAGAAGATGAGACTCCACTGCAGGTGAAGCTGAATGGTGTAGCAACTCTTATTGGTAAAATTGGTTTGACTTTTGCTGTATTGACATTCCTGGTGATGACAGGAAGGTTTCTCGTGGCAAAAGCTGCTCACCATCAATTTACGAAATGGACTTCAAGTGATGCACTAAAACTCTTAGATTTCTTTGCCATTGCAGTTACAATAATAGTTGTCGCAGTTCCTGAAGGTTTACCACTGGCAGTGACGTTGAGCCTTGCCTTTGCTATGAAGAAACTGATGACCGAAAGAGCACTAGTTAGGCACCTGTCTGCATGTGAAACGATGGGTTCGGCCAGTTGCATTTGCACAGATAAGACAGGGACGTTAACCACAAACCACATGATAGTTAGCCGTGCATGGGTTTGTGAACATTTTATGGAGAATAAAGACCATGGGAGTGTAGACAAATTGAAATCGGAGATCTCTGAAAACGTTTTAGGCATACTTTTGCAGTCCATATTTCAAAATACTAGCTGCGAAGTGACTAAAGATAAGGACGGGCAGAACTCGATCGTTGGTGGAACACCAACGGAATCAGCACTATTAGAGTTTGGCATCCATTTGGGTGGGGATTTTCATGCCCAACGTACAGAATATAATATACTTAAGGTTGAGCCTTTCAATTCTGTTAGGAAGAAGATGTCTGTACTTGTAGCACTTCCTAATGGTGGTGGGGTTAGAGCTTTTGTCAAAGGTGCATCTGAAATTATACTAGGAATGTGTGACAAGTATATTGATTCCAATGGAGAATCTATTGATTTAACAGATGAGACGGTAAAGAATGCTACAGACGTTATCAATAGTTTTGCCAATGAAGCTTTGAGGACACTTTGCTTGGCCTTCAAAGATTTAGGGGACCCCAGTGACAAATCTATTCCAGATGATGGATATACATTAATTACAGTTGTTGGAATCAAGGATCCTGTACGCCCAGGGGTCAAGGAAGCTGTTGAAACTTGTTTAAAAGCTGGAATAACTGTGCGTATGGTTACTGGTGACAATATTAATACAGCGAAGGCTATTGCCAAAGAATGTGGTATACTTACACACGGTGGTTTAGCTATAGAAGGACCAGACTTCCGTAATTTATCTACAGAACAGATGAAGCAAGTTATACCAAAACTCCAGGTGATGGCTCGGTCCTTGCCGCTGGACAAATACACATTGGTTAACAATTTGCGGAGTATGTTTGGCGAGGTCGTTGCAGTGACTGGAGATGGGACAAATGATGCTCCAGCTTTGCATGAGTCAGATATTGGACTAGCTATGGGCATTGCCGGGACTGAGGTGGCCAAAGAAAATGCCGATGTCATCATAATGGATGACAATTTTTCAACCATTGTAAATGTTGCGAGATGGGGACGTGCGGTGTATATTAACATACAAAAATTTGTGCAGTTTCAGCTAACAGTTAACATTGTTGCTCTAGTGATCAATTTTGTTTCTGCTTGCCTCTCAGGATCTGCTCCTCTTACGGCTGTTCAGTTGCTTTGGGTGAACTTGATTATGGACACTCTTGGTGCCTTGGCCCTGGCCACAGAGCCTCCAAATGATGCACTCATGCAGAGACCCCCAATTCCCAAGGGGGTTAGCTTTATTACCAAAGCCATGTGGAGGAACATTGTTGGTCAGAGTATCTATCAACTTGCTGTTCTTGCAGTTCTTAATTTTAGGGGAAAGCAACTTCTTGGACTTAGTGGAGCCGATTCCACGAAAGAACTTAATACTTTGATATTTAACTCATTTGTGTTCTGCCAGGTTTTCAACGAAATCAACAGCCGTGAGATAGAAAAGATCAACATATTCCGAGGGATGTTCAGCAGCTGGATATTTTTGGGAGTAATGGCATCCACAATTGGGTTTCAAATAATAATTGTTGAACTTCTGGGTGCTTTTGCAAGCACTGTACCACTAAGCTGGGAACTGTGGGGACTGAGCGTTTTGATTGGATTTGTAAGCATGCCAGTTGCAGTTGTGTTGAAGTTCATCCCTGTTCATAAGGAAACAGTCCATCATGATGGCTACGAACCACTCCCTTCTGGCCCAGAGCTGGCTTGA | 3012 | 42.33 | MSIEKYLLKDFEVEPKRPSPEALRRWRSAVSIVKNRRRRFRNTADLDKRSEAEKKKLKIQKAALQFIDDELASIVRSHDYKALKFHGGVEGLSRKVSVALDAGVSEKDVSKRQEIYGYNRYTEKPSRSFLVFLWEALHDVTLIILIFCALISLGVGIATEGWPKGTYDGLGILLSILLVVLVTSISDYRQSLQFKDLDREKQKIDVDVTRDGLRKKVSIYDLVVGDIVHLSIGNQVPADGVFISGYSLLIDESSLSGESEPVNIGVEKPFLLSGTKVQDGSGKMLVTTVGMKTEWGKLMETLSEGGEDETPLQVKLNGVATLIGKIGLTFAVLTFLVMTGRFLVAKAAHHQFTKWTSSDALKLLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMTERALVRHLSACETMGSASCICTDKTGTLTTNHMIVSRAWVCEHFMENKDHGSVDKLKSEISENVLGILLQSIFQNTSCEVTKDKDGQNSIVGGTPTESALLEFGIHLGGDFHAQRTEYNILKVEPFNSVRKKMSVLVALPNGGGVRAFVKGASEIILGMCDKYIDSNGESIDLTDETVKNATDVINSFANEALRTLCLAFKDLGDPSDKSIPDDGYTLITVVGIKDPVRPGVKEAVETCLKAGITVRMVTGDNINTAKAIAKECGILTHGGLAIEGPDFRNLSTEQMKQVIPKLQVMARSLPLDKYTLVNNLRSMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACLSGSAPLTAVQLLWVNLIMDTLGALALATEPPNDALMQRPPIPKGVSFITKAMWRNIVGQSIYQLAVLAVLNFRGKQLLGLSGADSTKELNTLIFNSFVFCQVFNEINSREIEKINIFRGMFSSWIFLGVMASTIGFQIIIVELLGAFASTVPLSWELWGLSVLIGFVSMPVAVVLKFIPVHKETVHHDGYEPLPSGPELA | 1003 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2792960 | 2804940 | + | Cp4.1LG03g08360.1 | Cpe03g00476 | 466193 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00476 | 1003 | SFLD | C1.7: P-type atpase like | 402 | 774 | - | - | |
Cpe03g00476 | 1003 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 86 | 984 | IPR023298 | - | |
Cpe03g00476 | 1003 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 422 | 428 | IPR018303 | - | |
Cpe03g00476 | 1003 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 8 | 51 | IPR024750 | GO:0005516 | |
Cpe03g00476 | 1003 | CDD | P-type_ATPase_Ca_PMCA-like | 109 | 855 | - | - | |
Cpe03g00476 | 1003 | Pfam | Cation transport ATPase (P-type) | 476 | 561 | - | - | |
Cpe03g00476 | 1003 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 5 | 989 | - | - | |
Cpe03g00476 | 1003 | SFLD | p-type atpase | 402 | 774 | IPR044492 | - | |
Cpe03g00476 | 1003 | PANTHER | CATION TRANSPORTING ATPASE | 5 | 989 | - | - | |
Cpe03g00476 | 1003 | SMART | Cation_ATPase_N_a_2 | 79 | 157 | IPR004014 | - | |
Cpe03g00476 | 1003 | Pfam | Cation transporting ATPase, C-terminus | 807 | 981 | IPR006068 | - | |
Cpe03g00476 | 1003 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 426 | 631 | IPR023299 | GO:0000166 | |
Cpe03g00476 | 1003 | SUPERFAMILY | Calcium ATPase, transduction domain A | 206 | 301 | IPR008250 | - | |
Cpe03g00476 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 722 | 741 | - | - | |
Cpe03g00476 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 746 | 758 | - | - | |
Cpe03g00476 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 251 | 265 | - | - | |
Cpe03g00476 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 420 | 434 | - | - | |
Cpe03g00476 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 641 | 651 | - | - | |
Cpe03g00476 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 619 | 630 | - | - | |
Cpe03g00476 | 1003 | PRINTS | H+-transporting ATPase (proton pump) signature | 754 | 779 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe03g00476 | 1003 | PRINTS | H+-transporting ATPase (proton pump) signature | 722 | 738 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe03g00476 | 1003 | PRINTS | H+-transporting ATPase (proton pump) signature | 580 | 598 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe03g00476 | 1003 | Gene3D | - | 135 | 981 | - | - | |
Cpe03g00476 | 1003 | Gene3D | - | 417 | 767 | IPR023214 | - | |
Cpe03g00476 | 1003 | Gene3D | - | 430 | 626 | IPR023299 | GO:0000166 | |
Cpe03g00476 | 1003 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 53 | 983 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Cpe03g00476 | 1003 | Gene3D | - | 18 | 68 | - | - | |
Cpe03g00476 | 1003 | Gene3D | - | 103 | 303 | - | - | |
Cpe03g00476 | 1003 | Pfam | E1-E2 ATPase | 202 | 398 | - | - | |
Cpe03g00476 | 1003 | Pfam | Cation transporter/ATPase, N-terminus | 86 | 152 | IPR004014 | - | |
Cpe03g00476 | 1003 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 172 | 446 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe03g00476 | 1003 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 688 | 810 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe03g00476 | 1003 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 518 | 667 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe03g00476 | 1003 | SUPERFAMILY | HAD-like | 419 | 827 | IPR036412 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00220 | Cpe-Chr2:1131171 | Cpe03g00476 | Cpe-Chr3:2792960 | 0 | dispersed | |
Cpe03g00476 | Cpe-Chr3:2792960 | Cpe13g00519 | Cpe-Chr13:5307701 | 0 | dispersed | |
Cpe03g00476 | Cpe-Chr3:2792960 | Cpe06g00200 | Cpe-Chr6:1073086 | 1.93E-10 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00476 | K01537 | - | csv:101206199 | 1722.98 |