Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00553 ATGGATCTGGAGAGTGCTATTGGGGGTCACCCAATCAAGAAAAATTCATGGAGAGCTGTTTTAACTTTGGCTTATCAAAGCTTGGGGGTTGTTTATGGCGATTTGAGCACTTCCCCTTTGTATGTTTACAAAAGCACATTTGCTGAGGATATAAAACACTCTGAAACCAACGAGGAGATTTATGGAGTTCTTTCTTTTATCTTCTGGACTCTCACGCTCATTCCTTTGATTAAATACGTCTTTATTGTGCTTCGAGCTGATGATAATGGCGAAGGGGGAACTTTCGCTTTGTACTCATTGCTCTGCCGCCATGCCCGAGTTAGCTCCTTGCCCAATTGCCAACTTGCAGATGAGGACCTTTCGGAATATACAAAAGATGGGGTGGATTTAATCAGCAAGAACACTTGTGGGTCGAGACTGAAATCCACGTTAGAGAAGCACAGAGTGTTGCAGAGGGTTTTGCTTGTTCTTGCTTTGATTGGCGCTTGCATGGTGATTGGAGATGGAGTTCTTACACCTGCAATTTCTGTTTTCTCTGCGGTTTCTGGGCTGGAACTCTCCATGGCTAAAGAACACCATCGCTATGTCGAAGTCCCGGTTGCTTGCATCATATTGGTAATACTGTTTGCAATTCAACATTATGGAACGCATCGAGTCGGGTTTCTGTTTGCACCGGTCGTAATTACCTGGCTCCTGTGTATCAGTGTCATAGGGTTGTACAATATCTTCCACTGGAATCCTCATGTTTACAAAGCACTCTCCCCATATTATATGTACAAGTTTCTGAAGAAGACTCAAAGGGGAGGTTGGATGTCCCTTGGCGGGATCCTGTTATGTATGACAGGTTCGGAAGCAATGTTTGCTGATCTCGGGCACTTCTCGCAGCTATCTATCAAGATTGCTTTCACTTTTGTGGTTTATCCAGCTTTGGTACTGGCGTATATGGGACAGGCTGCTTATCTTTCTCAACATCACGGCGAGGAAAGTAACTATCGAATCGGATTTTACGTGTCGGTTCCTGAGAAAATAAGATGGCCTGTTCTTGTGATCGCCATTTTAGCTGCGGTGGTCGGAAGTCAAGCTGTCATTACTGGGACGTTTTCAATAATAAAACAGTGCTCGGCATTGGGTTGCTTCCCGAGGGTCAAAATCGTTCATACCTCCTCGAAAATTCACGGTCAGATTTATATACCAGAGATCAACTGGACTTTGATGCTCTTATGCTTAGCTATTACAGGTGGCTTTCGAGACACGAAACGCATGGGGAATGCATCAGGTTTGGCAGTGATAACTGTTATGCTGGTGACAACCTGCCTAATGTCTGTAGTCATCATCTTGTGCTGGCATAAAAGCTTTCTCTTTGCCATTGCCTTCATACTATTTTTCGGGTCCATTGAATCACTCTACTTCTCGGCCTCTCTCATCAAGTTTCGAGAAGGGGCGTGGGTTCCCATCGTGCTCTCGTTCATCTTCCTACTAGTCATGTATGTATGGCATTACGGGACACGCAAAAAATACGAGTTTGATGTTCAAAACAAAGTCTCAATCAACTGGCTCCTAGGCCTAGGTCCCAGTTTAGGCATAGTACGAGTACGCGGGATAGGCCTCATATACACCGAGCTCGTCACAGGAATCCCAGCCATCTTCTCCCACTTCGTAACAAACCTCCCTGCCTTCCACCAAGTCCTAGTCTTCCTCTGCATCAAATCCGTCCCAGTCCCACACGTGAGACCAGGAGAGAGATTCCTAGTAGGAAGAGTCGGGCCAAAAGAATACCGTCTCTACCGATGCATAGCACGATATGGGTACCGCGACATCCACAAGGACGGCATGGAGTTTGAAAAAGACCTGGTATGCAGCATTGCAGAGTTCATCAGGTCCGAGAAGGTCGAAAGCAGTGTGAAAGTAGAGGACGTAGAAGAGAACGAGAGAATGACAGTGGTCGGGACATCGTCAACGCACGTAGATGGAGTAAGAATGTGCGAAGATGAAGGGGAAAGAGCAGAAACATCAGAGGTGAGAGAGATAAAATCACCCAAAAAAGTGAGGAAAAGAGTGAGGTTTCATCTACCAGAGAGGCCAGAAATGGATGTGGAGGCGAGGAGGGAGCTGGAAGAGCTGATGGAGGCAAGAGAGGCTGGAATGGCATTCATAATGGGGCATTCATATGTGAAGGCAAAGAGGGGATCAGGTTGGGTTAAGAAAGTGGTGATAAATTATGGGTATGATTTCTTGAGAAGGAACTCAAGAGGGCCAAGCTATGCTTGGAGTGTGCCTCATGCTTCTACTTTAGAGGTGGGGATGATCTACCAAGTTTGA 2319 46.01 MDLESAIGGHPIKKNSWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIYGVLSFIFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVSSLPNCQLADEDLSEYTKDGVDLISKNTCGSRLKSTLEKHRVLQRVLLVLALIGACMVIGDGVLTPAISVFSAVSGLELSMAKEHHRYVEVPVACIILVILFAIQHYGTHRVGFLFAPVVITWLLCISVIGLYNIFHWNPHVYKALSPYYMYKFLKKTQRGGWMSLGGILLCMTGSEAMFADLGHFSQLSIKIAFTFVVYPALVLAYMGQAAYLSQHHGEESNYRIGFYVSVPEKIRWPVLVIAILAAVVGSQAVITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWTLMLLCLAITGGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWHKSFLFAIAFILFFGSIESLYFSASLIKFREGAWVPIVLSFIFLLVMYVWHYGTRKKYEFDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVTGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDGMEFEKDLVCSIAEFIRSEKVESSVKVEDVEENERMTVVGTSSTHVDGVRMCEDEGERAETSEVREIKSPKKVRKRVRFHLPERPEMDVEARRELEELMEAREAGMAFIMGHSYVKAKRGSGWVKKVVINYGYDFLRRNSRGPSYAWSVPHASTLEVGMIYQV 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3247870 3252582 - Cp4.1LG03g07680.1 Cpe03g00553 466270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00553 772 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 772 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe03g00553 772 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe03g00553 772 TIGRFAM kup: potassium uptake protein 23 772 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe03g00553 772 PANTHER POTASSIUM TRANSPORTER 6 1 772 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02356 Cpe03g00553 CCT
Cpe01g02356 Cpe03g00553 ECH
Cpe03g00553 Cpe13g00909 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00089 Cpe-Chr1:535107 Cpe03g00553 Cpe-Chr3:3247870 0 dispersed
Cpe01g00994 Cpe-Chr1:5894275 Cpe03g00553 Cpe-Chr3:3247870 1.25E-172 dispersed
Cpe01g01519 Cpe-Chr1:9094534 Cpe03g00553 Cpe-Chr3:3247870 0 dispersed
Cpe03g00553 Cpe-Chr3:3247870 Cpe11g00002 Cpe-Chr11:3133 0 dispersed
Cpe14g00213 Cpe-Chr14:1199654 Cpe03g00553 Cpe-Chr3:3247870 0 dispersed
Cpe20g00853 Cpe-Chr20:7677981 Cpe03g00553 Cpe-Chr3:3247870 0 dispersed
Cpe01g02356 Cpe-Chr1:19727385 Cpe03g00553 Cpe-Chr3:3247870 0 wgd
Cpe13g00909 Cpe-Chr13:7755145 Cpe03g00553 Cpe-Chr3:3247870 0 wgd
Cpe03g00553 Cpe-Chr3:3247870 Cpe04g00561 Cpe-Chr4:6045306 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00553 K03549 - csv:101211664 1421.76