Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00554 | TCCAAGAAATGGAAAACCACCAGATTCTGTCAAAACCCAAACTGGGCTTCTCTGCTTCATTCAGAGAAGCCTTCAAAATCCTCTTTAATCATCCAAACTTCATCTCTCTCATTATCTTCATCTCTCTCCCCCTCTTGGCCTCCCTCTCAGCCCACAACATTCTTCTTCACCCAACCTTCATTCAACTTCTCAGCACTCATCTTCTTCCTTGACCTTCTCAACACAATTGCAATAGTCTCCATATCAGCAGCATTGTATGGAGGAAACTCTCAAATGGGTTTTAAAGAGATGCTAGTTCAAGTCAGGAAGATGGTGGCTTTGAAACTCAGAGGGTCATTGGCTACATCTCTATGCTCTGTTTTGTTGGCTTCACTCACTCTGTTGGGCTTGGTTGCTTTGTCAAAAGACTTCTTTTTTGTGGCTACAGGCAGCTCTCACATCTCAATAACAAACACCTTCCNTAGTTGCTTTGTCAAAAGACTTCTTTTTTATGGCTACAGGCAGCTCTCACATCTCAATAACAAACACCTTCCTCTTACAACTTTTCATCTTCACATTCATCATTGGGACACCTTTTGTGGTTTTTATGTAGAGTGGAGTGCTGTTTGGAATATGGGGATTGTTATCTCAATCTTGGATAAGAACCAGGGGTATATAGCCATAGGAGTGGCATCATATCTTAGCAGAGGTAGCAGAAAGCTTGGGTTCAGTTTGATGATGGTGGTTTTTGGGTTTCCATGTCTATATGCTTTGTGGAATGAGAGAAGTTGTGGGGTTTGGGAGAATGTGGTGTTTGTGAGCTTGAACGGTGTGGGGAATGTTGTGATAGAAGCCTTCAAAATCCTCTTTAATCATCCAAACTTCATCTCCCTCGTCCTCATCTCCTCCTTCCCCCTCTTCGCCTCCCTCCTCGCCCACCACATTCTCCTTCACCCAACCTTCATTCAACTCCTCAAACTTCTCTCAGAAGAAAATCCATCTGATCCATCTCCAAGGTACATCATCAGGTGTCGATTAGATGGCAGCACAGCCTGCATCTCGCAGCGCTCCTCTGATGACAACAACTTCAAAGCAACTCTCTCCCACAAGTTTCTGATATCAACTCTCATCTCTTCAGCACTCATCTTCTTCCTAGACCTTCTCTCCACAATCTCAACAGTATCTATATCAGCAGCAATATATGGAGGAAACTCCCAAATGGGTTTCAAACAGATGCTAGTTGAAGTCAGAAAGCGAGTGGCTGTAAGACTGAGAGGCTCATTGGCAACATCTCTGTATGCTCTTATACTTGCTTCACTAACTCTATTGGTGGCTCTAAGACTGAGAGGCTCATTGGCAACATCTCTGTATGCTCTTTTATTTGCTTCACTAACTCTATTGGGTTTAATCGCTTTGTCAACAAACATGTTTTTGATGCCAAAAAGCTCATTTATCTTTGGGACAATCTTTGTATTTCTGTTGACAAAATTCATAGAGTGGAGCGCTATTTGGAACATGGGAATTGTTATCTCAATCTTGGATAAGAACCATGGCTACATAGCAATTGGAGTGGCAGCATATCTAAGCAGAGGCAGGAGGAAGTTAGGGCTAAGTTTGATGCTGGTTTTCTTTGCTTTGAAGGTGGCTCTTGGGCTGCCATGTCTCTATGCTTTGTGGAATCAGGGGAGTTGTGGGGCATTGGGGAATGTGGTGTCCGTGAGTTTCAAGTGTGTGGGGGATATTCTAATGTGGATTGTTCTTATGGTTTATTTCTATGACTGTAAGAGGCAGTTTCTGGAGAAGAAGATCGATTTGGAGAATAATGTCCGCCATGGAAGCCTGCAAATTGGAGAGAAAACCGCCATGGCCAAGAATCAATGTTCTTGGCTATTACACGTCCAATTGGCCTCTCCACGATTTTCGCTTGCACCAACCCAATTACATCCCCATTTCCTCCTAAATTTCTCATTTCTTTCTTCTTCTTCCGATCTCCATCAACCCTCAATCTCTTCGCCGGCGTCCAAGTTCCGCCCCTTTCGGCGATACCTTGACGGCTCGTCCACCGATAAGACTACCGGCGTGGCGACCGCCACGGACGAACACCCTAATTACATCCTCCTCCGTTACCAAATCCTCGACCCTGACAGCGACATTGTCGCGCAATGGAATCGCTTGTTTCTAGTGACATGCCTGATTGCGCTATTCATCGATCCGATGTATTTCTACACGTCGTCTGTCGGGGGACCTGCCTGCCTGACATCGGAGGTGAATCTGGGAATAGTGATCACGTTCTTCAGAACGGTGATGGATCTGTTCTTCTTGCTGCACATGGTGCTCAAGTTTCGAACCGCGTATGTCGCTCCGAGCTCTAGGGTTTTTGGAAGGGGAGAGCTGGTTATGGATGCCAGAGCCATTGCAAAGCGCTATTTGAAATCTGATTTTGTGATTGATCTCGCCGCCACTCTCCCCCTCCCACAAATAGTGATGTGGTTGGTGATTCCAGCAACAAGACATTCAAGGGTGGATCATGCCAACAACACAATCGCTCTCCTTGTTCTTCTCCAATACGTTCCAAGGCTGTTCCTCATCTTCCCTCTCAACCAACGCATCATCAAAACCACTGGCGTTGTTGCCAAAACTGCCTGGGCTGGTGCTGCCTACAATCTCATCCTCTACATGCTTGCCAGTCATGTAACAACACCATATCTCGTCTCTCTACGTTCATCTTTACGTCATCTCGGGAGACAGTTCGCATGCTGGAAATCGGAGTGTGCAAAGGAAAATGCGTCCAAAGTTCTAACATGTCTTCCCATCTTCTTGGATTGCAACAGTTTGAATGACACTGACAGACAATATTGGCTGAATGTCACTCATGTTACTTCCAAATGCGATCCAAGGAATGAAAACATTAGGTTCAAATTTGGAATGTTCTCTGATGCTTTCACCAGTGATGTTGCCTCCTCCCATTTCATTGCTAAGTACTTTTATTGTCTTTGGTGGGGCCTCAGAAATTTAAGTTCTTACGGACAAACTTTGGACACAACAACTTACCTTGGCGAGACATTATTTTGCATATCAACGTGCATAGTTGGGTTGATACTATTTTCACAACTCATTGGCAATATGCAGCTTCTGTTTCCCATTTTGAAGACATATTTGCAGTCAATGACAGTAAGACTCGAAGAATGGAGGATAAAGAGAAGGGACACTGAAGAATGGATGCGACGTCGGAGACAGTTCGCATGCTGGAAATCGGAGTGTGCAAAGGAAAATGCGTCCAAAGTTCTAACATGTCTTCCCATCTTCTTGGATTGCAACAGTTTGAATGACACTGACAGACAATATTGGCTGAATGTCACTCATGTTACTTCCAAATGCGATCCAAGGAATGAAAACATTAGGTTCAAATTTGGAATGTTCTCTGATGCTTTCACCAGTGATGTTGCCTCCTCCCATTTCATTGCTAAGTACTTTTATTGTCTTTGGTGGGGCCTCAGAAATTTAAGTTCTTACGGACAAACTTTGGACACAACAACTTACCTTGGCGAGACATTATTTTGCATATCAACGTGCATAGTTGGGTTGATACTATTTTCACAACTCATTGGCAATATGCAGACATATTTGCAGTCAATGACAGTAAGACTCGAAGAATGGAGGATAAAGAGAAGGGACACTGAAGAATGGATGCGACGTCGTCAATTACCACCAGATTTGCAAGAACGAGTTCGACGATTCGTTCAATATAAATGGCAGGCCACGAGAGGAGTTAATGAAGAATCCATATTGCGTTCATTGCCCATTGACCTTCGCCGTGAGATTCAACAACATTTGTGTTTGTCGCTCGTTCGTCGTGTTCCTTTCTTCTCACAAATGGACGATCAACTTCTCGATGCCATATGCGAGCGCCTCGTCTCGTCCTTGTGTACTCAAGGAACGTATATCGTGCGAGAGGATGACCCAGTTAACGAAATGTTGTTTATTATAAGAGGACAACTAGAGAGCTCCACAACAAATGGCGGTCGTTCTGGCTTTTTCAACTCAATCACATTAAAACCAGGTGATTTTTGTGGTGAAGAACTATTGACATGGGCTTTGATGCCAAGTTCCAGTTTGAATATGCCTTCTTCTACTCGAACCGTCCGAGCACGTACAGAAGTTGAAGCCTTCGCCCTTCGAGCTGAAGATCTCAAGTTCGTCGCCGGACAATTCAAACGCCTGCATAGCAAGAAACTACAACATGCCTTTAGATACTATTCCCATCAATGGAGGACCTGGGGTGCTTGCTTAATTCAAGTAGCTTGGAGGAGGCTTAAGAAGAGAAAATTGGCAAAGAAATCAGTATTCAGAAACAGCTTAAGCTATGGAGATTCAATACAAGAAGATATCGAATACGACGTCGAGCTAGCAGAAGAACACTACGACCACGACGACGACGACAGTGATGAGGACATGTCTACTGCAGACTACATGAACAAAACTCAGCATCTAGGTGCTACACTTTTGGCTTCAAAGTTTGCTGCCAATACTAGAAAAGGAGTTCATCTAAAAGCCCAAAAATCCAAAGCTTCTAGTTTGAAAATGCCAAAGTTGTTTAAACCAGATGAACCTGATTTTTCTATGGATGGA | 4608 | 43.99 | SKKWKTTRFCQNPNWASLLHSEKPSKSSLIIQTSSLSLSSSLSPSWPPSQPTTFFFTQPSFNFSALIFFLDLLNTIAIVSISAALYGGNSQMGFKEMLVQVRKMVALKLRGSLATSLCSVLLASLTLLGLVALSKDFFFVATGSSHISITNTFXSCFVKRLLFYGYRQLSHLNNKHLPLTTFHLHIHHWDTFCGFYVEWSAVWNMGIVISILDKNQGYIAIGVASYLSRGSRKLGFSLMMVVFGFPCLYALWNERSCGVWENVVFVSLNGVGNVVIEAFKILFNHPNFISLVLISSFPLFASLLAHHILLHPTFIQLLKLLSEENPSDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFFLDLLSTISTVSISAAIYGGNSQMGFKQMLVEVRKRVAVRLRGSLATSLYALILASLTLLVALRLRGSLATSLYALLFASLTLLGLIALSTNMFLMPKSSFIFGTIFVFLLTKFIEWSAIWNMGIVISILDKNHGYIAIGVAAYLSRGRRKLGLSLMLVFFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNVRHGSLQIGEKTAMAKNQCSWLLHVQLASPRFSLAPTQLHPHFLLNFSFLSSSSDLHQPSISSPASKFRPFRRYLDGSSTDKTTGVATATDEHPNYILLRYQILDPDSDIVAQWNRLFLVTCLIALFIDPMYFYTSSVGGPACLTSEVNLGIVITFFRTVMDLFFLLHMVLKFRTAYVAPSSRVFGRGELVMDARAIAKRYLKSDFVIDLAATLPLPQIVMWLVIPATRHSRVDHANNTIALLVLLQYVPRLFLIFPLNQRIIKTTGVVAKTAWAGAAYNLILYMLASHVTTPYLVSLRSSLRHLGRQFACWKSECAKENASKVLTCLPIFLDCNSLNDTDRQYWLNVTHVTSKCDPRNENIRFKFGMFSDAFTSDVASSHFIAKYFYCLWWGLRNLSSYGQTLDTTTYLGETLFCISTCIVGLILFSQLIGNMQLLFPILKTYLQSMTVRLEEWRIKRRDTEEWMRRRRQFACWKSECAKENASKVLTCLPIFLDCNSLNDTDRQYWLNVTHVTSKCDPRNENIRFKFGMFSDAFTSDVASSHFIAKYFYCLWWGLRNLSSYGQTLDTTTYLGETLFCISTCIVGLILFSQLIGNMQTYLQSMTVRLEEWRIKRRDTEEWMRRRQLPPDLQERVRRFVQYKWQATRGVNEESILRSLPIDLRREIQQHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLCTQGTYIVREDDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLKPGDFCGEELLTWALMPSSSLNMPSSTRTVRARTEVEAFALRAEDLKFVAGQFKRLHSKKLQHAFRYYSHQWRTWGACLIQVAWRRLKKRKLAKKSVFRNSLSYGDSIQEDIEYDVELAEEHYDHDDDDSDEDMSTADYMNKTQHLGATLLASKFAANTRKGVHLKAQKSKASSLKMPKLFKPDEPDFSMDG | 1536 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3258098 | 3265945 | + | Cp4.1LG03g07710.1 | Cpe03g00554 | 466271 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00554 | 1536 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 1071 | 1534 | - | - | |
Cpe03g00554 | 1536 | Gene3D | Helix hairpin bin | 1209 | 1272 | - | - | |
Cpe03g00554 | 1536 | MobiDBLite | consensus disorder prediction | 1511 | 1536 | - | - | |
Cpe03g00554 | 1536 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 694 | 1070 | - | - | |
Cpe03g00554 | 1536 | Gene3D | Jelly Rolls | 1279 | 1399 | IPR014710 | - | |
Cpe03g00554 | 1536 | Pfam | Ion transport protein | 715 | 1036 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cpe03g00554 | 1536 | Pfam | Ion transport protein | 1119 | 1208 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cpe03g00554 | 1536 | Pfam | Cyclic nucleotide-binding domain | 1304 | 1391 | IPR000595 | - | |
Cpe03g00554 | 1536 | Gene3D | - | 719 | 1040 | - | - | |
Cpe03g00554 | 1536 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 | 1071 | 1534 | - | - | |
Cpe03g00554 | 1536 | SUPERFAMILY | Voltage-gated potassium channels | 1144 | 1245 | - | - | |
Cpe03g00554 | 1536 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 | 694 | 1070 | - | - | |
Cpe03g00554 | 1536 | SUPERFAMILY | cAMP-binding domain-like | 1211 | 1406 | IPR018490 | - | |
Cpe03g00554 | 1536 | SUPERFAMILY | Voltage-gated potassium channels | 706 | 1039 | - | - | |
Cpe03g00554 | 1536 | CDD | CAP_ED | 1281 | 1412 | IPR000595 | - | |
Cpe03g00554 | 1536 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 1281 | 1411 | IPR000595 | - | |
Cpe03g00554 | 1536 | SMART | cnmp_10 | 1281 | 1412 | IPR000595 | - | |
Cpe03g00554 | 1536 | MobiDBLite | consensus disorder prediction | 1522 | 1536 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00554 | Cpe-Chr3:3258098 | Cpe04g01281 | Cpe-Chr4:10588515 | 4.59E-144 | dispersed | |
Cpe18g00838 | Cpe-Chr18:7736171 | Cpe03g00554 | Cpe-Chr3:3258098 | 1.73E-85 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00554 | K05391 | - | csv:101216651 | 822.772 |