Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00586 ATGGAACCACTTGTTGATGGTATGAGTTCTTTACTGAAAAATCAAAACCCGACATCTGCATCAAGGATTCTTGATTCCTCTAAACCGTCGAAGAATGAAGCAACTTCTTCGACTTCCTGTGTTATGTCTCAAAATTGTGCCAAGAAACCAATTCGCCATCCAAATGGTTCTTCTGTAAGTAGTAAAAAACATCCTGCCAATTTGAACCAAGATGTGCAGCTTGAAGATTTAGCTGATGTGGAAAAACATACACATGTTTCGAATAAGGGGAAATCCGAGCTTGTGAAGCCTATTATCGACGATTCTAAGGATTGTTGTTCAAATGGCTTGGAAGAATCTGGAAATCAAGTATTGAACGCATCAAAAGTAGCTGCCACACAAATAAATGACCAACAAAAGTCTCAGCCAGCTGAATTATCTTGTCCAAGTCCTCAGGCCAGCATATATTCCACGACTTTATATGCAGAGGCCAAACAAAGTTTCTCAAACACAGAAGTGAGTGAATGTGCAAGCAGCATTGACAAGTCTTGTGAAAGCATCAACATCACGAGTTCCTATGATATTGACAAAAGCAGGAAGACGAGTGTGTACCGAGGCAGCACTGGCAGTGATATCAGTGATGAGAGCAACTCGAGTAGTTTAAGCAATGCCATGTCTAAGCCCCATCAGGCAAATGACACAAGATGGGAAGCATTACAAGTCGTGAGATCCCATGATGGGATGTTAGGATTGAACCATTTCCGGTTGCTTCGAAGACTGGGATGTGGCGATATTGGTAGCGTCTATCTTTCGGAGTTAACTGGTACCAAAACTTACTTTGCCATGAAGGTTATGGATAAGGCTGCTTTGGCAAGTAGGAAGAAGCTTCTGAGGGCTCAGACTGAACGTGAGATATTGCAATCTCTGGATCATCCATTCCTGCCAACTTTGTATACACATTTCGAGACAGAGAAGTTCTCTTGTTTGGTAATGGAGTTTTGCCCCGGGGGCGACTTGCACGCGCTTCGGCAGAGACAACCTGGGAAATATTTTCCTGAGCATGCTGCAAGATTCTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTATCTGCACATGCTTGGGATAATCTACAGGGACCTAAAACCTGAAAATGTGTTAGTGAGAGATGATGGACACATAATGCTATCTGATTTTGACCTCTCTCTTAGATGTGCGGTCTCCCCGACCCTTGTTAAATCGTCGAACTCGGGTTTAGAAGCTAAAAGCTCAGGATACTGTGTCCAGCCTGCTTGCATTGAGCCAACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCATGTTTTACGCCTCGATTCTTTAGCAGACACAGGAAAGAAAAGAAGTCGAAACCGAAACCGAAAAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTCATTGCAGAACCGACAAGTGCGAGATCGATGTCTTTTGTTGGTACACATGAGTACCTGGCACCTGAAATCATAAAAGGTGAAGGCCATGGCAGTGCTGTGGATTGGTGGACTTTTGGGATCTTTCTTTACGAGCTTTTGTTCGGTAGAACTCCGTTCAAGGGGGCAGGGAACCGTGCTACATTATTTAACGTGGTTGGTCAGCCATTGAGATTTCCAGAGTCTCCTTCTGTGAGCTTTGCAGCAAGGGACTTGATCCGAGGTTTGCTTGTAAAAGAACCACAACATCGTCTCGCTTATAGACGCGGTGCTACCGAGATCAAGCAACATCCATTCTTCCAAAGCGTGAATTGGGCACTCATCCGCTGCGCCAATCCTCCAGAGGTACCAAGAATGGATGTCATTGATTTCTCTTCAAAAATGGGGGCACCACACGCCGCTGCAGCCGCTGCAGCAGCAGCAGCAGCAGCAGGCGAAAAGATGCCGGGAGTCGACGTGAAGCCTGAAGGTAACTATTTAGAGATTGACTTCTTTTGA 1953 45.11 MEPLVDGMSSLLKNQNPTSASRILDSSKPSKNEATSSTSCVMSQNCAKKPIRHPNGSSVSSKKHPANLNQDVQLEDLADVEKHTHVSNKGKSELVKPIIDDSKDCCSNGLEESGNQVLNASKVAATQINDQQKSQPAELSCPSPQASIYSTTLYAEAKQSFSNTEVSECASSIDKSCESINITSSYDIDKSRKTSVYRGSTGSDISDESNSSSLSNAMSKPHQANDTRWEALQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKYFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNSGLEAKSSGYCVQPACIEPTCIMQPDCIQPACFTPRFFSRHRKEKKSKPKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRMDVIDFSSKMGAPHAAAAAAAAAAAAGEKMPGVDVKPEGNYLEIDFF 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3529869 3533927 + Cp4.1LG03g07290.1 Cpe03g00586 466303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00586 650 MobiDBLite consensus disorder prediction 1 65 - -
Cpe03g00586 650 MobiDBLite consensus disorder prediction 195 225 - -
Cpe03g00586 650 MobiDBLite consensus disorder prediction 9 65 - -
Cpe03g00586 650 Gene3D Phosphorylase Kinase; domain 1 240 332 - -
Cpe03g00586 650 Pfam Protein kinase domain 482 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00586 650 Pfam Protein kinase domain 248 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00586 650 PANTHER FLIPPASE KINASE 1-RELATED 38 650 - -
Cpe03g00586 650 CDD STKc_phototropin_like 246 608 - -
Cpe03g00586 650 Gene3D Transferase(Phosphotransferase) domain 1 333 602 - -
Cpe03g00586 650 MobiDBLite consensus disorder prediction 195 223 - -
Cpe03g00586 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 368 380 IPR008271 GO:0004672|GO:0006468
Cpe03g00586 650 SUPERFAMILY Protein kinase-like (PK-like) 221 607 IPR011009 -
Cpe03g00586 650 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 38 650 - -
Cpe03g00586 650 ProSiteProfiles Protein kinase domain profile. 247 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00586 650 SMART serkin_6 247 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00586 Cpe-Chr3:3529869 Cpe10g01239 Cpe-Chr10:9546367 0 dispersed
Cpe03g00586 Cpe-Chr3:3529869 Cpe04g00529 Cpe-Chr4:5753669 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62278 PF00069 Pkinase 8.80E-36 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00586 K08286 - csv:101219962 1118.22