Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00608 ATGCCAAGCGTGGCTGTGAAGCTCTACAGCGTGTTCTTCAAGTTTCTCTTGAAGCATCGTTTGCAGAATCTGATCCAAGCTCCACTTGACGAATCGAGTCCTTTTGGAGTTACATCGCGACCCGAAGAAACGGTTGCTTCTGCTAATCCTTTGTTCACCGACGGCGTTGCTACCAAGGATATTCACATCGATCCGTTTACATCTCTCAGCATTCGGATCTTCCTCCCTGAATCTTCGCTTACTCCGCCTGAAACCGACTCCAAACCCTCTTCTAAATCGTCGAAGGCTAAACCTAAATGGCACAGTCAAGATCTTCAACTGGATCTTGTTAATCAGAATCTGGATAATTTACAGCCGTATTCTTCTCGACGAAATAGCTATGGTCCTTTGGGAAATTCTAGGGAAGAACTGCGGGTGAATAGAGTTGGGGGTTACAGTAATGAAATAGAGGGGTTGAATTTGATTCCGGGCCCCGCCACCGGTGGTGTTTACAGAGGGTATGCACCGGCGGCGCAGAATGGTCGGAGGTTGCCGGTGATGTTGCAATTTCATGGCGGGGGGTGGGTTAGTGGTAGCAATGATTCTGCAGCCAATGATTTCTTTTGCCGGAGGATTGCAAAATTGTGTGATGTTATTGTCATAGCCGTAGGGTATCGTCTTGCGCCCGAGAATCGTTTTCCGGCGGCGTTTGAGGATGGATTGAAGGTGTTGAATTGGTTGGGGAAGCAGGCCAATTTGGCCGAGTGTAGCAAGTCTATGGGCAATACAAAAGGCTATGGCAATGAGTTCAAGAAGTCGGATAATCACAGGCATATTGTTGACACATTTGGGGCGTCAATGGTAGAGCCTTGGTTGGCCGCCCATGGAGACCCAACAAGATGCGTTCTTCTTGGGGTTAGCTGTGGAGCAAATGTTGCTGATTACGTGGCTCGAAAGGCTGTCGAGGCTGGTAAGCTCTTGGACCCCGTCAAGGTGGTCGCGCAGGTTCTCTTGTACCCATTCTTCGTAGGAAGTGTTCCCACTCATTCGGAGTTGAAGTTAGCGAATTCGTATTTTTACGACAAAGCTATGTGCCTTCTTGCTTGGAAACTATTCCTACCCGAGGAAGAGTTTAATCTCGATCATCCAGCTGCAAACCCCCTTGTTTCTGGTAGAGAAGGGCCACCTCTAAAGCTCATGCCACCAACACTGACAGTGGTGGCTGAACTCGATTGGATGAGAGACCGAGCCATAGCTTACTCTGAAGAACTTCGAAAGGTAAATGTCGATGCCCCTGTTCTTGACTACAAGGATGCAGTGCACGAATTCGCGACCCTTGACATTCTTCTCAAGACACCTCAAGCCCAAGCTTGCGCCGAGGACATAGCCATTTGGGTCCAAAAATATATTTCACTACGAGGCCATGAGTTCTCTTATTGA 1419 48.48 MPSVAVKLYSVFFKFLLKHRLQNLIQAPLDESSPFGVTSRPEETVASANPLFTDGVATKDIHIDPFTSLSIRIFLPESSLTPPETDSKPSSKSSKAKPKWHSQDLQLDLVNQNLDNLQPYSSRRNSYGPLGNSREELRVNRVGGYSNEIEGLNLIPGPATGGVYRGYAPAAQNGRRLPVMLQFHGGGWVSGSNDSAANDFFCRRIAKLCDVIVIAVGYRLAPENRFPAAFEDGLKVLNWLGKQANLAECSKSMGNTKGYGNEFKKSDNHRHIVDTFGASMVEPWLAAHGDPTRCVLLGVSCGANVADYVARKAVEAGKLLDPVKVVAQVLLYPFFVGSVPTHSELKLANSYFYDKAMCLLAWKLFLPEEEFNLDHPAANPLVSGREGPPLKLMPPTLTVVAELDWMRDRAIAYSEELRKVNVDAPVLDYKDAVHEFATLDILLKTPQAQACAEDIAIWVQKYISLRGHEFSY 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3642829 3647566 - Cp4.1LG03g07040.1 Cpe03g00608 466325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00608 472 SUPERFAMILY alpha/beta-Hydrolases 164 463 IPR029058 -
Cpe03g00608 472 PANTHER ARYLACETAMIDE DEACETYLASE 20 452 - -
Cpe03g00608 472 Pfam alpha/beta hydrolase fold 180 437 IPR013094 GO:0016787
Cpe03g00608 472 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 180 196 IPR002168 GO:0016787
Cpe03g00608 472 Gene3D alpha/beta hydrolase 137 467 IPR029058 -
Cpe03g00608 472 MobiDBLite consensus disorder prediction 80 99 - -
Cpe03g00608 472 PANTHER CARBOXYLESTERASE 16-RELATED 20 452 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00608 Cpe-Chr3:3642829 Cpe01g02619 Cpe-Chr1:21193651 4.37E-34 dispersed
Cpe03g00608 Cpe-Chr3:3642829 Cpe04g00509 Cpe-Chr4:5631187 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00608 - - csv:101219102 865.144