Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00622 ATGCCATTATTCCGGCCACCGGCCGGCGACTTTTTCAGTCACTCCTCGCCGCCGACGTACCCTCTCATCGGCTGTCTCCTCTCCTTCTACAATAACCGGAACCGCCTGTTGGATTGGTACACTGAGCTATTGTCGGGATCTGCCACCGGTACCATCGTCGTCCGCCGCCTTGGATGTCGGAGGACGGTGGTGACGGTGAACCCCGATAACGTTGAGTATATTTTGACGACCCATTTCGTTAATTTCCCTAAAGGGAAGCCTTTCACTGAGATTTTAGGTGACTTTCTTGGCTGTGGCATTTTCAACGTGGACGGCGAGCTATGGCGCACGCAACGGAAGCTGGCTAGCCATGAGTTCAGCGCCAAGTCGTTGCAGGAATTTGTCGTCGAGACGTTGGAGTCGGAGGTTGAGATGCGGTTGTTGCCCGCCCTCGAGACGTCTTCTCGAGATGGTGCAATCGTTGACTTACAGGATTTACTCAAAAGATTTGCATTCGGAGTAATATGTAAAGTTGTGTTAGGGAGCAAAGAAGAGACTATTCTCGAACTTGAAAAGAGCTTTGACGTAGCGTCGAAAGTGAGCGCTGGGAGGGCGATGGAGCCGGTTTACATGATATGGAAAGTGAAGAGATGGTTCGGGGTTGGATCGGAGCGGCGGCTGAAGACGGCGGTGGCGGAGGTTCACCGGAAAGTGAAGAACATAATTGAGAAAAGAAGGGAGAAGAAGAAGATGGAGGATCTCCATGAGAGAAAAGATCTGTTGTCCAGCTTCATCATGGCGGGACGGGACACGACTTCGGCTGCAATGACATGGCTGTTTTGGCTACTCTCCCATCATCCGAACATCCAGAATCAATTAGTTGAAGAGATAGACTCGGAATCAGCATTAAGAGTTGAACAAAAATTGGACTACAAATCTCTAAAGGAGCTGAAATTTCTCAAGGCATGCCTATGTGAAACCATGAGAATGTATCCGCCCGTCCCATGGGATTCAAAGCATGCTATTGCCGACGATCACTTACCAGACGGGACTCTGGTCCAAGCCGGGGATAGAGTGACATATTTCCCATATGGGATGGGTAGAATGGAGCGTTTGTGGGGGAAGGACTGGTTTGAGTTCAAGCCAAGTCGATGGCTTCTCGAGCCCGACGGGCGTGGCCGGAGAAGAGGGGTGAAGTTGGTCAGTCCATACAAGTTTCCAATATTTCAGGCAGGGCCGAGAGTGTGTTTGGGGAAGGAGATGGCTTTCATTCAGATGAAGTATGTGGTGGCGTCAATTCTCAGCCAATTCAGAATCAAACCCATTGCCGCCGACCACCCTGTGTTTGTGCCGCTGTTGACGGCACACATGGTCGGCGGCTTCAAAGTTTTGTGTCAAAGGAGAGAGAAAGAGGAGAGAGAGAGAGCCAATTCAAGACAAACAATCAAACAAAATTCCCAAGTTAAACAATTAGAAGAAGACTCAAGTCAACGATTCCAACACTGA 1485 49.9 MPLFRPPAGDFFSHSSPPTYPLIGCLLSFYNNRNRLLDWYTELLSGSATGTIVVRRLGCRRTVVTVNPDNVEYILTTHFVNFPKGKPFTEILGDFLGCGIFNVDGELWRTQRKLASHEFSAKSLQEFVVETLESEVEMRLLPALETSSRDGAIVDLQDLLKRFAFGVICKVVLGSKEETILELEKSFDVASKVSAGRAMEPVYMIWKVKRWFGVGSERRLKTAVAEVHRKVKNIIEKRREKKKMEDLHERKDLLSSFIMAGRDTTSAAMTWLFWLLSHHPNIQNQLVEEIDSESALRVEQKLDYKSLKELKFLKACLCETMRMYPPVPWDSKHAIADDHLPDGTLVQAGDRVTYFPYGMGRMERLWGKDWFEFKPSRWLLEPDGRGRRRGVKLVSPYKFPIFQAGPRVCLGKEMAFIQMKYVVASILSQFRIKPIAADHPVFVPLLTAHMVGGFKVLCQRREKEERERANSRQTIKQNSQVKQLEEDSSQRFQH 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3717285 3719282 - Cp4.1LG03g06890.1 Cpe03g00622 466339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00622 494 SUPERFAMILY Cytochrome P450 17 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 Gene3D Cytochrome P450 13 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 PRINTS E-class P450 group I signature 314 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 PRINTS E-class P450 group I signature 269 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 PRINTS E-class P450 group I signature 46 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 PRINTS E-class P450 group I signature 409 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 PRINTS E-class P450 group I signature 249 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 PRINTS E-class P450 group I signature 399 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 Pfam Cytochrome P450 16 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 Pfam Cytochrome P450 253 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 MobiDBLite consensus disorder prediction 465 494 - -
Cpe03g00622 494 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 15 461 - -
Cpe03g00622 494 PRINTS P450 superfamily signature 260 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 PRINTS P450 superfamily signature 315 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00622 494 PANTHER CYTOCHROME P450 15 461 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00622 Cpe-Chr3:3717285 Cpe05g00048 Cpe-Chr5:255317 7.20E-138 dispersed
Cpe18g00897 Cpe-Chr18:8079669 Cpe03g00622 Cpe-Chr3:3717285 0 wgd
Cpe03g00622 Cpe-Chr3:3717285 Cpe04g01611 Cpe-Chr4:12527159 0 wgd
Cpe03g00622 Cpe-Chr3:3717285 Cpe04g00490 Cpe-Chr4:5518571 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00622 K20665 - csv:101207598 764.607