Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00631 | ATGGAGAATTATCAGATGTTCTTCCCTTGCTCCAACGGCGGCGGACTGTCGGCTTTTAGTCAACCCGACATCTCATCCGGCACCGCCTCTGACATGTTCCGGAATTTTCACGGCGGCGATCCGCAAGCAAGTGGGGTTTTGGGGCTTAAGACAGAGGTGGTTACGGCGGCGGTGGAAGCCGACGGGAACTGTGGCGGCAGCGGAAATAAGAAAGGGGAGAAGAAGGTGAGGAAACCCAGATATGCTTTTCAGACGAGGAGTCAAGTTGACATTCTTGACGATGGATATCGTTGGAGAAAATATGGTCAAAAAGCAGTAAAAAACAACAAGTTTCCTAGGAGCTATTATCGGTGCACGCATCAAGGGTGCAATGTGAAGAAGCAAGTGCAAAGACTAACAAGAGACGAAGGGGTGGTGGTAACGACGTATGAAGGCATGCATACACACTCCATTGATAAACCAACCGACAACTTTGAACAAATCTTGAGTAGAATGCAGATTTACAGTACTCCTTTTTGA | 519 | 47.98 | MENYQMFFPCSNGGGLSAFSQPDISSGTASDMFRNFHGGDPQASGVLGLKTEVVTAAVEADGNCGGSGNKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYSTPF | 172 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3760638 | 3762359 | - | Cp4.1LG03g06840.1 | Cpe03g00631 | 466348 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00631 | 172 | ProSiteProfiles | WRKY domain profile. | 87 | 152 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe03g00631 | 172 | Pfam | WRKY DNA -binding domain | 93 | 149 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe03g00631 | 172 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 167 | IPR044810 | GO:0003700 | |
Cpe03g00631 | 172 | PANTHER | WRKY TRANSCRIPTION FACTOR 75-RELATED | 1 | 167 | - | - | |
Cpe03g00631 | 172 | SMART | WRKY_cls | 92 | 151 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe03g00631 | 172 | Gene3D | WRKY domain | 70 | 152 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe03g00631 | 172 | SUPERFAMILY | WRKY DNA-binding domain | 84 | 151 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00631 | Cpe-Chr3:3760638 | Cpe03g01223 | Cpe-Chr3:9956281 | 3.18E-57 | dispersed | |
Cpe08g00072 | Cpe-Chr8:462927 | Cpe03g00631 | Cpe-Chr3:3760638 | 1.15E-19 | dispersed | |
Cpe01g00649 | Cpe-Chr1:3759854 | Cpe03g00631 | Cpe-Chr3:3760638 | 1.02E-38 | transposed | |
Cpe03g00631 | Cpe-Chr3:3760638 | Cpe04g00481 | Cpe-Chr4:5469872 | 5.64E-91 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49194 | PF03106 | WRKY | 3.40E-26 | CL0274 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00631 | - | - | csv:101219349 | 283.493 |