Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00700 ATGGCCTTCATAATTTTTCTAACAACACTTCTTCTAATATTTATTGCATCACTTGCAAGGATTTCATATGATACTTTCTCATTCTACTGCCTCACCCCTAGAAGAATTCGGAAGACGATGGAGCAACAAGGCGTTCGTGGCCCGAAGCCCCGGCTGCTGATCGGAAACATCCTTGACGTAGCGGGACTTGTGGCGAAGTCCACGGCCAACGACATGAGCTCAATTGATCATGATATCGTCGACCGCTTATTGCCTCATTACACCATTTGGACAAAGCAATATGGGAAGAGGTTTATTTACTGGAACGGGACCGAGCCGCGGCTGTGTCTGGCCGAGACGGAGTTGATCAAAGAACTGTTGGGGAAGAAGAGTAGTGTGTGTGGGAGATCATGGCTGCAACGACAGGGGACCAAACATTTCATAGGGAAAGGATTGTTGATGGCAAATGGGGAAGATTGGTATCATCAACGTCACATCGTGGCTCCTGCGTTTATGGGAGATAAGCTTAAGAGCTATGCGGGGTTCATGGTGGAATGCACTAACAAAATGATCCAATCAATGGAGACCGAGTTGGAATCGGGCCGGACCGAGTTCGAGATCGCCGATTACATGAAGCAACTCACCGCCGACATCATTTCCCGGACCGAGTTCGACACCGACTCCGACAAGGGTAACCAAATCTTCCACTTACTCACTCTTCTCCAGCGCCTCTGCGCCCAAGCCAGCCGCCACCTCTGCCTTCCCGGTAGCCGGTTTGTTCCAAGTAAATACAACAGAGAAATAAAGTCACTAAAGAAGGAAGTGGAGAGGCTGTTAATGGAGATCATTGAAAGCAGAAAAGATGGTCTAAACATGGTGATAAACGAGTCCCTAAGGCTCTACCCGCCCGCCACGGTGCTTCCAAGAATGGCGTTGGAGGACATGAAGCTAGGAGACATGGACATCCCCAAAGGCCTGTCCATATGGATTCCGGTGCTGGCGATTCACCACAGCGAAGAGCTATGGGGCAAAGATGCCAACCAGTTCAACCCCAACAGGTTCGGCGCCAAGGCGTTCGGTGGCGGGCGGTTCATTCCATTTGCAGGCGGACCAAGAAACTGCATCGGCCAAGGGTTCGCCATCATGGAAGCTAAGATCATCTTGGCTATGTTGCTGTCCAAGTTTAGGTTCACTATTTCCGACACTTATCGCCATGCTCCTGTTGTTGTTCTCACCATTCAGCCTAAGTATGGAGTTCAAGTTTGTTTGACTCCCTTCACTTCTTAG 1266 49.76 MAFIIFLTTLLLIFIASLARISYDTFSFYCLTPRRIRKTMEQQGVRGPKPRLLIGNILDVAGLVAKSTANDMSSIDHDIVDRLLPHYTIWTKQYGKRFIYWNGTEPRLCLAETELIKELLGKKSSVCGRSWLQRQGTKHFIGKGLLMANGEDWYHQRHIVAPAFMGDKLKSYAGFMVECTNKMIQSMETELESGRTEFEIADYMKQLTADIISRTEFDTDSDKGNQIFHLLTLLQRLCAQASRHLCLPGSRFVPSKYNREIKSLKKEVERLLMEIIESRKDGLNMVINESLRLYPPATVLPRMALEDMKLGDMDIPKGLSIWIPVLAIHHSEELWGKDANQFNPNRFGAKAFGGGRFIPFAGGPRNCIGQGFAIMEAKIILAMLLSKFRFTISDTYRHAPVVVLTIQPKYGVQVCLTPFTS 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4238938 4242753 + Cp4.1LG03g06240.1 Cpe03g00700 466417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00700 421 PRINTS P450 superfamily signature 285 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00700 421 PRINTS P450 superfamily signature 358 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00700 421 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00700 421 Gene3D Cytochrome P450 283 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00700 421 PRINTS E-class P450 group I signature 357 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00700 421 PRINTS E-class P450 group I signature 367 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00700 421 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00700 421 SUPERFAMILY Cytochrome P450 78 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00700 421 Coils Coil 261 281 - -
Cpe03g00700 421 PANTHER CYTOCHROME P450 FAMILY MEMBER 283 415 - -
Cpe03g00700 421 Pfam Cytochrome P450 283 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00700 421 Pfam Cytochrome P450 91 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00700 421 Gene3D Cytochrome P450 29 282 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g00700 421 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 282 - -
Cpe03g00700 421 PANTHER CYTOCHROME P450 FAMILY PROTEIN 283 415 - -
Cpe03g00700 421 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 282 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00700 Cpe13g01023 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02475 Cpe-Chr1:20450584 Cpe03g00700 Cpe-Chr3:4238938 4.24E-92 dispersed
Cpe03g00700 Cpe-Chr3:4238938 Cpe13g01023 Cpe-Chr13:8427343 7.03E-171 dispersed
Cpe09g00232 Cpe-Chr9:1328125 Cpe03g00700 Cpe-Chr3:4238938 2.96E-11 transposed
Cpe02g01430 Cpe-Chr2:12409752 Cpe03g00700 Cpe-Chr3:4238938 8.66E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00700 K10717 - csv:101213604 496.893