Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00709 ATGAAGCAAGACAACACTCATCAATCCCCAAACCCCGCCGCCGCCGAGACCGAGAAATTGGCGGTCGGTGACCAGGACGAAGACGAGCTTCTAGCTGCTCTAGGCTACAATGTCCGGTCGTCGGACATGTCTGATGTAGCTCTGAAAATAGAACAGCTTGAAATGGTGATGGGGTTATCCGAACATGATGGAATTTCTCATCTCTCTTCCAATACAATCCATTATAATCCCTCCGATATGTCTTCTTGGATTGAAACCATGATTGATGAACTCAATAACCCTGTTCATGTCGGAGATGAATCCATCCCCGCCATCGCCACCACTGCCGCCTTCACCGATGACTCTGAGTATGATCTTCGAGTAATTCCGGGCATTGCTGCTTACCCTCAACTTAATTCCACCACCACCAGAAAGCGATGCAAGAACTTCGATTGCGAATCGGTTCTTGTTAAGGCACCGTCGTTCTCGGAGCCGTCGCGCTCGGTGGTTCTGGTGGATTCCGCTGAGACCGGCGTCCATTTGGTCCATAGCCTACTTGCCTGCGCCGATGCCGTCAGTCAAAACAACCTTAACCTCGCCGAAGCTATACTCAAACATATCAAAATCCTCGTCGACGTTCAGACCGGCGCTGTAAGAAAAGTCGCCGGGTTTTTCGCCCAAGCTCTGACTTACCGGATTTACCGATTCTACCCATTGAAGCCCTTCGATTGTTCATCTTCATACACCGATCAACTCCAAATCCATTTCTATGAATCTTGCCCTTATCTGAAATTTGCCCATTTCACTGCCAATCAAGCCATTCTGGAATCCATCGGATTATCCGGTTCTGTCCACGTCATCGATTTCAACCTCCAGCAAGGCCTCCAATGGCCGCCGTTAATTCAGGCCCTCGCACTCCGTCCAGGTGGACCTCCGGCGTTTTATCTCACTGGAATCAGCTCCCCGCCGGGCGACGGATTACAGAAAGTGGGTACGAAATTGACCAATTTCGCGGAGAAATTCGGCGTTAAATTCGAATTCCGTGGTTTCTACTGTAAAAATTTCGGCGATCTCGAACCGTTCATGCTCGATTTAGAATCGGAAACCGTGGCTATAAATTCCATTTTCGAGCTCCACCGGCTACTGGCTTATCCAGGAGTGATTCAAAAAGCTCTAACCACGATCAAAGCTCTGAACCCGAAAGTCATCACTCTGGTGGAGCAGGTCGCGAACCACAATGGGCCATCGTTCATGGAACGATTCACAGAAGCACTGCACTATTACTCGAGCTTATTCGATGCGCTTGAAGAAGCGTCGGTCGCTGGGTCGTTGGATGTGGTGAGGTCGGAGGAGTATTTAGGGAGACAAATCTGCAACGTGGTGGGATGTGAAGGTACCGATCGGGTCGAGCGGCATGAAACGGTGGCGCAGTGGCTGAGCCGAATGCAGTCGAGTGGGTTCGAGATGATTCATCTGGGTTCAAACGCGTTCAAGCAGGCGAATACTCTGCTGTCGGCTCTGTTCCATGGAAGAAATGGGTACAAAGTTGAAGAGAATAACGGGAGTTTGACGTTGGGTTGGCACACTCGGCCACTCATCGCCACCTCTGCCTGGACTGTCCCCGTCGCCAGCGGCACCGGCACCAGCACCGGCACCGGCGGGCCGAAGTGA 1650 51.39 MKQDNTHQSPNPAAAETEKLAVGDQDEDELLAALGYNVRSSDMSDVALKIEQLEMVMGLSEHDGISHLSSNTIHYNPSDMSSWIETMIDELNNPVHVGDESIPAIATTAAFTDDSEYDLRVIPGIAAYPQLNSTTTRKRCKNFDCESVLVKAPSFSEPSRSVVLVDSAETGVHLVHSLLACADAVSQNNLNLAEAILKHIKILVDVQTGAVRKVAGFFAQALTYRIYRFYPLKPFDCSSSYTDQLQIHFYESCPYLKFAHFTANQAILESIGLSGSVHVIDFNLQQGLQWPPLIQALALRPGGPPAFYLTGISSPPGDGLQKVGTKLTNFAEKFGVKFEFRGFYCKNFGDLEPFMLDLESETVAINSIFELHRLLAYPGVIQKALTTIKALNPKVITLVEQVANHNGPSFMERFTEALHYYSSLFDALEEASVAGSLDVVRSEEYLGRQICNVVGCEGTDRVERHETVAQWLSRMQSSGFEMIHLGSNAFKQANTLLSALFHGRNGYKVEENNGSLTLGWHTRPLIATSAWTVPVASGTGTSTGTGGPK 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4282487 4284136 - Cp4.1LG03g06090.1 Cpe03g00709 466426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00709 549 MobiDBLite consensus disorder prediction 1 24 - -
Cpe03g00709 549 Gene3D - 26 91 IPR038088 -
Cpe03g00709 549 PANTHER DELLA PROTEIN RGL1 25 532 IPR030006 GO:0003712|GO:0005634
Cpe03g00709 549 Pfam GRAS domain family 174 532 IPR005202 -
Cpe03g00709 549 ProSiteProfiles GRAS family profile. 165 532 IPR005202 -
Cpe03g00709 549 SMART DELLA_2 28 101 - -
Cpe03g00709 549 Pfam Transcriptional regulator DELLA protein N terminal 28 94 IPR021914 -
Cpe03g00709 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 532 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01442 Cpe03g00709 CCT
Cpe01g01990 Cpe03g00709 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00709 Cpe-Chr3:4282487 Cpe13g00364 Cpe-Chr13:3951163 0 dispersed
Cpe02g01442 Cpe-Chr2:12454581 Cpe03g00709 Cpe-Chr3:4282487 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49204 PF03514 GRAS 7.10E-116 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00709 K14494 - csv:101203095 773.467