Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00710 ATGGCGACGCTAATGTCGGGCTCCAGAGTTCAACCAGCAGCTTGTGTTGTTCTTTCCTCCTCCATCAAGCACCATTTGGGTTTTAATTCCCTTCGTCGTTCCAATTGCTCCTTCTCTCATTTTCACCATTCCCCCTTCTCCTTCAGGCGCTCTGGAGCTAGACGAGCTCTCTCTGTTTCCATGTCCGTTAGCCCTCTTGAAGCCTGTGTCAAAGCTTCCATTACCGTTCCCAACAAGCTCGGCGACTGCCCTTTTTGCCAAAGAGTATTACTGACTTTGGAGGAAAAGCGTCTACCCTATGACCTAAAGTTGGTAGACCTGTCAAACAAGCCAGAATGGTTCTTAGAAATAAGTTCAGAGGGGAAAGTTCCCGTTGTTAAATTTGATGAACAGTGGGTTGCAGATTCAGATGTTATAACACAAACACTGGAAGAGAAGTACCCAAACCCACCTTTAGCGACCCCTCCTGATAAATCTTCAGTAGGATCAAAGATTTTCTCCACGTTTATTGCTTTTCTAAAGAGCAAGGATCCTAATGATGGAACAGAACAAGCATTACTTAGCGAGCTGAGTTATTTCGATTCTCACATCAAAGAGAATGGCCCTTTTATCAATGGGAAAGAGATTTCTGCAGCAGACCTGTCACTTGGTCCAAAGTTGTACCATTTAGAAATTGCATTGGGTCACTATAAGAACTGGTCAGTTCCAGACAGCCTACCCTACGTTAAGTCTTACACGAAGAGCATATTTTCAAGAGAATCATTTGCAAAAACTCGTGCCCTTCCTGAGGATGTTATTGCTGGTTGGCGTCCAAAGGTCTTAGGTTAA 828 44.2 MATLMSGSRVQPAACVVLSSSIKHHLGFNSLRRSNCSFSHFHHSPFSFRRSGARRALSVSMSVSPLEACVKASITVPNKLGDCPFCQRVLLTLEEKRLPYDLKLVDLSNKPEWFLEISSEGKVPVVKFDEQWVADSDVITQTLEEKYPNPPLATPPDKSSVGSKIFSTFIAFLKSKDPNDGTEQALLSELSYFDSHIKENGPFINGKEISAADLSLGPKLYHLEIALGHYKNWSVPDSLPYVKSYTKSIFSRESFAKTRALPEDVIAGWRPKVLG 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4288149 4292588 + Cp4.1LG03g06220.1 Cpe03g00710 466427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00710 275 CDD GST_C_DHAR 152 272 - -
Cpe03g00710 275 SFLD Main (cytGST) 82 249 - -
Cpe03g00710 275 Gene3D Glutaredoxin 65 152 - -
Cpe03g00710 275 SUPERFAMILY GST C-terminal domain-like 146 272 IPR036282 -
Cpe03g00710 275 CDD GST_N_family 83 144 - -
Cpe03g00710 275 Pfam Glutathione S-transferase, N-terminal domain 82 151 IPR004045 -
Cpe03g00710 275 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 73 151 IPR004045 -
Cpe03g00710 275 Gene3D - 153 274 - -
Cpe03g00710 275 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 5 274 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cpe03g00710 275 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 5 274 - -
Cpe03g00710 275 SFLD Glutathione Transferase (cytosolic) 82 249 IPR040079 -
Cpe03g00710 275 SUPERFAMILY Thioredoxin-like 81 150 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01113 Cpe-Chr1:6580517 Cpe03g00710 Cpe-Chr3:4288149 1.65E-76 dispersed
Cpe03g00710 Cpe-Chr3:4288149 Cpe05g01048 Cpe-Chr5:6927048 2.84E-06 dispersed
Cpe03g00710 Cpe-Chr3:4288149 Cpe01g00205 Cpe-Chr1:1155976 4.34E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00710 K21888 - csv:101203335 478.789