Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe03g00725 | ATGGAGAATTTAATGGGTCTCCTCAGAATCCATGTCTTTAGAGGTGTCAATCTTGCTGTAAGAGACGTTGTTAGCAGTGATCCATATGTCGTTTTCAAGATGGGCAAACAGAAGTTGAAGACTCGAGTAGTGAAACAAAATATCAACCCAGAATGGAACGAAGATCTAACTCTATCAATCCAAGATCCAAACCTTCCCGTCTACTTGATCGTATACGACAAGGACAAGTTCTCGTTCGATGACAGGATGGGGGATGCGGAGTTCGACGTTCGACCGTTCGTGGAGGCGGTGAAGATGAGATTGAACAACCTCCCAAATGGAACCATCATAAGGAAGGTTCAACCAAGTAGGGAGAATTGCTTGTCTGAAGAGAGTTGCATAGTTTGGGGAAATGGTCAAGTTAGTCAAAGAATGTTTCTAAGGCTAAGAAATGTGGAGTCTGGTGAAGTTGAGCTGCAATTGCAATGGATTGATATTCCTGGCTCTAGGGGTATACATTAA | 501 | 43.11 | MENLMGLLRIHVFRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKQNINPEWNEDLTLSIQDPNLPVYLIVYDKDKFSFDDRMGDAEFDVRPFVEAVKMRLNNLPNGTIIRKVQPSRENCLSEESCIVWGNGQVSQRMFLRLRNVESGEVELQLQWIDIPGSRGIH | 166 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 4422149 | 4423327 | + | Cp4.1LG03g05920.1 | Cpe03g00725 | 466442 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe03g00725 | 166 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
| Cpe03g00725 | 166 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Cpe03g00725 | 166 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
| Cpe03g00725 | 166 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 164 | IPR044562 | - | |
| Cpe03g00725 | 166 | Gene3D | C2 domain | 4 | 161 | IPR035892 | - | |
| Cpe03g00725 | 166 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE | 1 | 164 | - | - | |
| Cpe03g00725 | 166 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 104 | IPR035892 | - | |
| Cpe03g00725 | 166 | CDD | C2_ArfGAP | 6 | 148 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe02g01454 | Cpe03g00725 | CCT | |
| Cpe02g01454 | Cpe03g00725 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe03g00725 | Cpe-Chr3:4422149 | Cpe18g00677 | Cpe-Chr18:6805030 | 7.65E-85 | dispersed | |
| Cpe20g00153 | Cpe-Chr20:872328 | Cpe03g00725 | Cpe-Chr3:4422149 | 5.55E-13 | dispersed | |
| Cpe02g01454 | Cpe-Chr2:12546919 | Cpe03g00725 | Cpe-Chr3:4422149 | 2.80E-65 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe03g00725 | - | - | csv:101218477 | 308.145 |