Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00817 ATGGAGGAGACTTTTGTTCCTCTTCGTGGAATCAAGAATGATCTTAAAGGGAGGTTAGTGTGCTACAAACAAGACTGGACCAGTGGGTTGAGAGCTGGATATAGGATTTTGGCTCCCACTACTTACATATTCTTTGCCTCTGCAATTCCTGTCATTTCATTTGGTGAACAGTTGGAGAGAAGTACTGATGGGGTACTCACTGCTGTTCAAACCTTAGCCTCCACAGCTCTTTGTGGTATCATTCACTCCATTGTTGGAGGTCAACCTTTGCTCATCTTAGGAGTGGCAGAGCCTACTGTTATTATGTATACCTTCATGTTTAATTTTGCGAAGGAACGACCCGAGTTGGGTCGGAATCTGTTTCTAGCATGGAGTGGATGGTATGATTTGCTAATTGCTTCAAAGAAACTAGAATTGGTCTCTAATGAAGTTCTTCAATTCTTGTTGTTGACTCAACTTTGTATGAACTTGTGTATCTTTAGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCTTAATGGCTATATTAGGAGCTTGTTCCATCATTAATCGGTTCACACGTCTCGCTGGTGAATTGTTCGGTATGCTTATAGCAATGCTTTTCATGCAGCAAGCAGTGAAAGGACTCGTGGATGAGTTTCGCATCCCGGAACGGGAAAATGCAACGTTGATCGAGTTTATACCTTCTTGGAGGTTTGCCAATGGGATGTTTGCTTTGGTATTGTCATTTGGCCTTCTACTCACTTCGTTAAGGAGTCGAAAGGCACGGTCGTGGCGATATGGATCAGGTTGGCTCAGAAGCTTGATAGCAGACTATGGAGTGCCGCTCATGGTTCTTGTTTGGACAGGTATTTCCTATATACCCTCAAAAAGTGTCCCACAAGGAATCCCGAGGCGACTCTTTAGCCCGAATCCGTGGTCTCACGGTGCGTACGAAAATTGGACTGTTATTAAGGATATGCTCGACGTTCCTGTTAGTTATATCTGTGGTGCTTTCATCCCGGCTACGATGATCGCGGTGCTTTACTATTTCGATCATAGTGTTGCATCTCAACTTGCTCAGCAGAAAGAGTTCAATTTGAGGAAACCATCTTCTTACCATTATGATTTACTTCTATTGGGATTCTTGACCTTAATATGTGGTCTTCTAGGAATCCCTCCATCCAATGGTGTCATCCCACAATCTCCGATGCATACGAAGAGCCTGGCTACTCTCAAACACCAGTTGTTGCGGAATAAACTCGTAGAAACGGCACAGAGTAGTATGAGAAAGAATGCGAGCTTGGGTCAGTTATATAGAAATATGCAAGAAGCATATCAACAAATGCAGACCCCTTTGATCTACCAACAGCCTGCGGTTCGTGGACTGAATGAGCTTACGGAGACAACCATTCAAGCAGCTTCTAGTATGGGCAGTTTCGACGCTCCGGTTGATGAGACAATATTCGATATCGAAAAGGAAATCGACGATCTATTGCCTGTTGAGGTGAAAGAACAGCGTGTCAGTAACTTGCTTCAAGCTGCAATGGTGGGAGGATGCGTTGCAGCCATGCCGATCCTTAAAAAGATCCCGACATCGGTTCTATGGGGTTACTTCGCCTTTATGGCTATCGAAAGCTTGCCTGGTAATCAGTTTTGGGAAAGAATCTTGTTGCTCTTCACTGCACCTAGCAGAAGATACAAAGTTCTTGAGGATTACCACGCGACGTTCGTCGAGACCGTGCCGTTCAAGGCCATTGCTCTTTTTACCATTTTTCAAACAGTATATTTGTTCATATGTTTTGGACTAACATGGGTTCCAATTGCTGGGGTGATGTTTCCTCTAATGATTATGCTCCTTGTCCCTGTAAGACAATACCTTCTTCCCAAGTTTTTCAAAGGTGCACATCTCCAAGATCTCGATGCAGCCGAATTCGAAGAAGCGCCAGCTTTACCGTTTAATCTTGCAACGGAAGCCGAGCTCGGTGCAGGAGCATCGTTCGGTGGGGACAGAGAGATTTTAGACGAGGTTATCACTCGTAGCCGTGGTGAATTTAGGCATATTAGCAGTCCTAAAATCACAAGCTCCACGGCAACGCCAATGTGTGACCGAAAAAGTATCGATAGCCCTCGTCGCTCTTTCAGCCCTCGGGTGAGCGAGCTAAGAGGAGAGCCGAGTCCTCGAGCCAGTGAACGAGGAACACCGGGTCAGAGAAGTGCAGAAGCTAAGCCATCCAGTTTGGGAAAGAGCCCTCTTAAGAACACAGCATCAAAGTAG 2256 45.35 MEETFVPLRGIKNDLKGRLVCYKQDWTSGLRAGYRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWYDLLIASKKLELVSNEVLQFLLLTQLCMNLCIFRVCVWTAALLFLMAILGACSIINRFTRLAGELFGMLIAMLFMQQAVKGLVDEFRIPERENATLIEFIPSWRFANGMFALVLSFGLLLTSLRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGISYIPSKSVPQGIPRRLFSPNPWSHGAYENWTVIKDMLDVPVSYICGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLICGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVETAQSSMRKNASLGQLYRNMQEAYQQMQTPLIYQQPAVRGLNELTETTIQAASSMGSFDAPVDETIFDIEKEIDDLLPVEVKEQRVSNLLQAAMVGGCVAAMPILKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKAIALFTIFQTVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEFEEAPALPFNLATEAELGAGASFGGDREILDEVITRSRGEFRHISSPKITSSTATPMCDRKSIDSPRRSFSPRVSELRGEPSPRASERGTPGQRSAEAKPSSLGKSPLKNTASK 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5092684 5096403 - Cp4.1LG03g04940.1 Cpe03g00817 466534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00817 751 MobiDBLite consensus disorder prediction 682 696 - -
Cpe03g00817 751 Pfam HCO3- transporter family 494 584 IPR011531 GO:0006820|GO:0016021
Cpe03g00817 751 Pfam HCO3- transporter family 8 113 IPR011531 GO:0006820|GO:0016021
Cpe03g00817 751 Pfam HCO3- transporter family 236 407 IPR011531 GO:0006820|GO:0016021
Cpe03g00817 751 Gene3D Helical hairpin bin 18 60 - -
Cpe03g00817 751 PANTHER BORON TRANSPORTER 2-RELATED 161 733 - -
Cpe03g00817 751 PANTHER BORON TRANSPORTER 2-RELATED 1 128 - -
Cpe03g00817 751 MobiDBLite consensus disorder prediction 732 751 - -
Cpe03g00817 751 PANTHER ANION EXCHANGE PROTEIN 161 733 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cpe03g00817 751 PANTHER ANION EXCHANGE PROTEIN 1 128 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cpe03g00817 751 MobiDBLite consensus disorder prediction 682 751 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01540 Cpe03g00817 CCT
Cpe02g01540 Cpe03g00817 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00817 Cpe-Chr3:5092684 Cpe20g00245 Cpe-Chr20:1386587 0 dispersed
Cpe02g01540 Cpe-Chr2:13082660 Cpe03g00817 Cpe-Chr3:5092684 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00817 K24194 - csv:101205388 1318.52