Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe03g00823 | ATGGCAACCATGGCTCTTTCATCTACATTCACCGGAAAGGCTATTCCTTTGAACGCACCAACCGAGCTCTCATCCTCGGTTCGCAGCAACAGTAGAGTCTCAATGAGGAGAGCTGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTACGGTCCCGACCGTGTCAAGTACCTTGGACCACTCTCTGGTGAGCCTCCATCTTACCTCAAAGGGGAGTTCCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCCGATCCCGAGACCTTTGCCAAGAACCGGGAGCTGGAAGTGATTCACAGCAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCACGCACAGAGCATTTTGGCCATTTGGGCATCTCAGGTAGTGCTAATGGGTGCAGTTGAAGGTTACCGTATTGCTGGAGGACCACTTGGAGAAGTTACCGATCCCATCTACCCCGGCGGTAGCTTTGATCCCCTCGGGCTGGCTGACGATCCCGAGGCATTTGCAGAGCTTAAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTCGCAGATCATCTTGCAGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTCCCTGGGAAGTGA | 738 | 51.9 | MATMALSSTFTGKAIPLNAPTELSSSVRSNSRVSMRRAGKPAASSGSPWYGPDRVKYLGPLSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK | 245 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 5135966 | 5136752 | - | Cp4.1LG03g04900.1 | Cpe03g00823 | 466540 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe03g00823 | 245 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC | 210 | 245 | - | - | |
| Cpe03g00823 | 245 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 210 | 245 | IPR001344 | GO:0009765|GO:0016020 | |
| Cpe03g00823 | 245 | SUPERFAMILY | Chlorophyll a-b binding protein | 48 | 242 | - | - | |
| Cpe03g00823 | 245 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC | 2 | 210 | - | - | |
| Cpe03g00823 | 245 | Gene3D | Chlorophyll a/b binding protein domain | 56 | 238 | - | - | |
| Cpe03g00823 | 245 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 2 | 210 | IPR001344 | GO:0009765|GO:0016020 | |
| Cpe03g00823 | 245 | Pfam | Chlorophyll A-B binding protein | 65 | 211 | IPR022796 | - | |
| Cpe03g00823 | 245 | MobiDBLite | consensus disorder prediction | 26 | 46 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe02g01544 | Cpe03g00823 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe03g00823 | Cpe-Chr3:5135966 | Cpe10g00102 | Cpe-Chr10:680220 | 1.23E-151 | dispersed | |
| Cpe20g00513 | Cpe-Chr20:2981021 | Cpe03g00823 | Cpe-Chr3:5135966 | 1.40E-64 | transposed | |
| Cpe02g01544 | Cpe-Chr2:13109098 | Cpe03g00823 | Cpe-Chr3:5135966 | 1.85E-161 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe03g00823 | K08912 | - | csv:101203342 | 469.929 |