Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00907 ATGGCGGATCTCAAAGAGCGGTTGCTTCCACCGAAACCTTCATCTGCTATTAATCTTAGGGAGACAATTAATAATCGACCATCAGCCTCTGGGAGGGTGCCTTTTCAAGGTGTGGATGTTCTAGGGCTGAAGAAGCGAGGGCAGGGACTTAGATCTTGGATCCGAGTAGATTCCTCTGGGAACTCCCAGATTATTGAGGTTGATAAGTTCACCATGATGCGTCGTTGTGATCTACCTGCGCGTGATTTACGTTTGCTTGATCCTTTGTTTGTTTACCCTTCAACAATTCTTGGTAGAGAGAAGGCTATTGTGGTCAATCTAGAGCAGATTCGATGCATTATAACAGCTGAAGAAGTTTTGCTATTAAATTCCCTTGATAGTTATGTACTGCAGTATGTGGTAGAGCTACAGAGGCGATTGAAAACCACCGGGGTTGATGAGGTTTGGCAGAATGACACAAATCATGGAGCTGACTTAAATCGAAGAAGAGGAAGCAGGAATTTCGATAACGTATTTGGAAACACCTCTCCTGATTATTTGCCCTTTGAATTCAGAGCTTTAGAAGTTGCTTTGGAAGCAGCTTGTACATTTCTTGATTCCCAGGCTGCAGAGTTAGAAATCGAAGCATACCCGTTGCTAGATGAACTTACATCCAAAATCAGTACATTAAATTTGGAGCGGGTCCGCCGCTTGAAAAGTAGACTTGTTGCCCTGACTCGTAGGGTTCAGAAGGTTAGGGATGAAATAGAGCAGCTCATGGATGACGATGGAGATATGGCAGAAATGTATCTGACTGAGAAGAAAATGAGAATGGAATCCTTTGTTTATGGCGATCAATCTGTTACTGGATACAGATCAATTGATGGAGCATCCTTTTCTGCTCCTGTTTCTCCTGTATCTTCACCACCTGAATCTCGCAAGCTCGAGAAGAGCCTGAGCATTGCCAGGAGCCGGCATGAGAGTACGAAAAGTTCAGAAAGTTCAACTGAAAATATAGAGGAGCTTGAGATGCTTCTTGAAGCATATTTTGTTGTCATTGATAGCACCCTGAATAAGTTGACATCGTTGAAGGAATACATCGATGACACAGAAGATTTCATCAACATCCAGCTGGATAATGTACGTAACCAGTTGATCCAGTTTGAGCTGCTACTCACTACTGCAACATTTGTCGTTGCCATTTTTGGGGTGGTAGCTGGAATTTTTGGCATGAATTTTGAAATACCAATGTTTGGGAATCCTGATGCATTCAAATGGGTTCTTCTAATAACAGGAGTAAGTGGAATTATCATATTTTCTGCATTTGTTTGGTTTTTCAGATACAAAAGACTGATGCCACTCTAA 1344 42.19 MADLKERLLPPKPSSAINLRETINNRPSASGRVPFQGVDVLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITAEEVLLLNSLDSYVLQYVVELQRRLKTTGVDEVWQNDTNHGADLNRRRGSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKMRMESFVYGDQSVTGYRSIDGASFSAPVSPVSSPPESRKLEKSLSIARSRHESTKSSESSTENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFGNPDAFKWVLLITGVSGIIIFSAFVWFFRYKRLMPL 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5828686 5832064 + Cp4.1LG03g08910.1 Cpe03g00907 466624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00907 447 Gene3D Magnesium transport protein CorA, transmembrane region 385 445 - -
Cpe03g00907 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 447 IPR039204 -
Cpe03g00907 447 Pfam CorA-like Mg2+ transporter protein 327 435 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe03g00907 447 CDD Mrs2_Mfm1p-like 53 444 IPR039204 -
Cpe03g00907 447 Gene3D Magnesium transport protein CorA, transmembrane region 125 378 - -
Cpe03g00907 447 MobiDBLite consensus disorder prediction 293 307 - -
Cpe03g00907 447 Gene3D - 41 124 - -
Cpe03g00907 447 MobiDBLite consensus disorder prediction 309 329 - -
Cpe03g00907 447 MobiDBLite consensus disorder prediction 293 329 - -
Cpe03g00907 447 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 447 - -
Cpe03g00907 447 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 384 437 IPR045863 -
Cpe03g00907 447 Coils Coil 228 255 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01612 Cpe03g00907 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00907 Cpe-Chr3:5828686 Cpe07g00089 Cpe-Chr7:430584 3.25E-147 dispersed
Cpe02g01612 Cpe-Chr2:13498264 Cpe03g00907 Cpe-Chr3:5828686 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00907 K16075 - csv:101217419 799.275