Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00911 ATGGCGGGTAAGGCGGCGCCCGCGAGGCATGTTCTGTTTGGAAAATACGAAATGGGTCGGCTATTGGGGAAAGGAACCTTTGCGAAGGTCTACCATGGAAGAAACTTGATCACCCACGACACTGTCGCCATTAAAGTCATCCTCAAGGACAGGGTAAAGAAACAGGGACTTCTTGACCAAGTCCGGCGAGAAATTTCTGTCATGGGGTTGGTTCGTCATCCCCATATAGTGGAATTGAAAGAAGTCATGGCCACGAAATCCAAGGTGTATTTTGTGATGGAATACGTTAATGGAGGCGAACTGTTTGTTAAATTGTCTCAACAAGGAAAATTGACTGAAGATGGAGGAAGAAAGTACTTTCAACAGCTTCTCTCCGCCGTGGACTTTTGCCACAGCCGTGGTGTCTCTCACCGTGATTTGAAGCCTGAAAATCTCCTTCTCGACGAGAATGGGAATTTGAAGGTATCTGATTTTGGTCTCTCCGCCCTGCCGGAGCAGCTCCGGATCGACGGATTGCTTCACACACGGTGTGGAACACCGGCGTATGTAGCTCCTGAGGTGCTCAGAAAGAGGGGATACGAGGGCGCTAAGTCGGATCTTTGGTCTTGTGGAGTGATTTTGTTTGTGTTGCTTGCTGGGTCTCTGCCATTTAAAGCTGATAATGTGATGAAGTTGTATAGGAAGATTTTCAAGGCGGAGTTTGAGTTTCCTCCTTGGTTTTCTTCAGAAGCTAAGGAAATGGTGTCCAAGCTTCTGGTTGTTGATCCTGAGAAGAGAGCTTCAATGGATGAGATAATGCAGAGTTCTTGGTTTCAAAAGGGCTTCACAAAGCCACTTTCATTCAATGACAAAGATGAATTCAACAGTGAAATCTCTGAATTGGCGAATCCCAAGTTGTTGTCATCTTCTCCTCCTTTCTACAATGCCTTCGAGTTCATCTCCACAATGTCCTCTGGTTTTGACTTGACTAGTTTGTTTGAAAGCAAGAAGAAACAAGCCTCAATTTTCACTTCAAAATGCTCTGCTTCAGCCATTATAGCCAAGCTTCAGTCTCTAGCGCAGAAGCTGAACTTCAAGGCTACTAATCAGAGGGAGTTCAAGGTGAGACTGCAGGCCAAGGAGGAGGGGAGGAAAGGGAAGCTGGCGGTGACGATGGAGGTTTACGAGGTAGCGCCGGAGCTGGCGGTGGTCGAGTTCTCGAAGTCGGCGGGGGACACATTGGAGTACAATAAGTTTTGTGAGAAGGATGTGAGGCCTGCATTGAAGGACATAGTTTGGAGCTGGCAAGGAGAGAATGAGTGCCTATAA 1308 47.17 MAGKAAPARHVLFGKYEMGRLLGKGTFAKVYHGRNLITHDTVAIKVILKDRVKKQGLLDQVRREISVMGLVRHPHIVELKEVMATKSKVYFVMEYVNGGELFVKLSQQGKLTEDGGRKYFQQLLSAVDFCHSRGVSHRDLKPENLLLDENGNLKVSDFGLSALPEQLRIDGLLHTRCGTPAYVAPEVLRKRGYEGAKSDLWSCGVILFVLLAGSLPFKADNVMKLYRKIFKAEFEFPPWFSSEAKEMVSKLLVVDPEKRASMDEIMQSSWFQKGFTKPLSFNDKDEFNSEISELANPKLLSSSPPFYNAFEFISTMSSGFDLTSLFESKKKQASIFTSKCSASAIIAKLQSLAQKLNFKATNQREFKVRLQAKEEGRKGKLAVTMEVYEVAPELAVVEFSKSAGDTLEYNKFCEKDVRPALKDIVWSWQGENECL 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5862134 5863441 + Cp4.1LG03g08900.1 Cpe03g00911 466628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00911 435 PANTHER - 9 434 - -
Cpe03g00911 435 Pfam NAF domain 304 360 IPR004041 GO:0007165
Cpe03g00911 435 SUPERFAMILY Protein kinase-like (PK-like) 12 272 IPR011009 -
Cpe03g00911 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Cpe03g00911 435 CDD CIPK_C 308 422 - -
Cpe03g00911 435 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00911 435 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 9 434 - -
Cpe03g00911 435 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00911 435 Gene3D Transferase(Phosphotransferase) domain 1 9 309 - -
Cpe03g00911 435 ProSitePatterns Protein kinases ATP-binding region signature. 22 54 IPR017441 GO:0005524
Cpe03g00911 435 Gene3D Kinase associated domain 1, KA1 310 427 - -
Cpe03g00911 435 SMART serkin_6 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00911 435 ProSiteProfiles NAF domain profile. 302 327 IPR018451 GO:0007165
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01618 Cpe03g00911 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00329 Cpe-Chr2:1747908 Cpe03g00911 Cpe-Chr3:5862134 0 dispersed
Cpe03g00911 Cpe-Chr3:5862134 Cpe20g00467 Cpe-Chr20:2703149 3.30E-170 dispersed
Cpe18g00670 Cpe-Chr18:6742435 Cpe03g00911 Cpe-Chr3:5862134 1.01E-26 dispersed
Cpe03g00911 Cpe-Chr3:5862134 Cpe06g00299 Cpe-Chr6:1642721 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62288 PF00069 Pkinase 7.10E-76 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00911 - - csv:101218600 781.171