Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g00913 | ATGCCGATCGATACCTCCTCTGCAGTTTCCGGCCAAATTGTGTGTGTCACCGGCGCTGGAGGCTTCATTGCTTCTTGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACTGTTCGAGGAACTGTTAGAAACCCAGATGATCAAAAGAATGCTCATTTGAAGCAATTGGATGGAGCTAATGAGCGTCTCTCTTTGTATAGCGCTGATCTTCTTGATTTTGAAAGCCTCAAAGCTGCTATTATGGGCTGCGATGGTGTCTTCCACACTGCCTCTCCGGTCACCGATGACCCCTGTGGAAATTATGTACAGAATTGGTATTGCTATGCCAAGACAATAGCAGAGCAGGCAGCATGGGCCGTGGCAGAAGAAAAAGGAGTGGATTTAGTAGTGGTGAACCCAATGTTGGTATTGGGGCCTCTATTGCAAGAGGGTGTGAATGCGAGCGTGGTTCATATAATGAAGTACTTGACAGGGTCAGCCAAGACATATGTAAATGCAGTTCAAGGATATGTTGATGTCAAGGATGTGGCCAAAGCCCATGTGTTGGTTTATGAAACTCCGTCAGCCTCAGGCAGATATATATGCGTTGAGAGCATGCTTCATCGTGGAGAATTGGTTGATGTTCTTGCTAAGTTGTTCCCTCAATATCCACTTCCAACCAAGTGTTCTGATGAGGTGAATCCCAGAAAGAAGCCTTATAAATACAGTGTTGAGAAATTGAAGTCATTGGGAATGGAGTTCACACCAATCAAACAATGCATATATGAAACAGTGAAGAGCTTACAAGAAAAGGGTCATCTTCCTCTGCCCTCCCAACTTCAGCATTGA | 828 | 45.05 | MPIDTSSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLKQLDGANERLSLYSADLLDFESLKAAIMGCDGVFHTASPVTDDPCGNYVQNWYCYAKTIAEQAAWAVAEEKGVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDVLAKLFPQYPLPTKCSDEVNPRKKPYKYSVEKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSQLQH | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 5889908 | 5892023 | - | Cp4.1LG03g08880.1 | Cpe03g00913 | 466630 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g00913 | 275 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 102 | 270 | - | - | |
Cpe03g00913 | 275 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 9 | 97 | - | - | |
Cpe03g00913 | 275 | Pfam | NAD(P)H-binding | 18 | 131 | IPR016040 | - | |
Cpe03g00913 | 275 | PANTHER | CINNAMOYL-COA REDUCTASE | 9 | 97 | - | - | |
Cpe03g00913 | 275 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 7 | 262 | IPR036291 | - | |
Cpe03g00913 | 275 | CDD | FR_SDR_e | 14 | 244 | - | - | |
Cpe03g00913 | 275 | Gene3D | - | 101 | 275 | - | - | |
Cpe03g00913 | 275 | Gene3D | - | 4 | 100 | - | - | |
Cpe03g00913 | 275 | PANTHER | CINNAMOYL-COA REDUCTASE | 102 | 270 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00913 | Cpe-Chr3:5889908 | Cpe03g00915 | Cpe-Chr3:5924193 | 2.01E-75 | dispersed | |
Cpe03g00913 | Cpe-Chr3:5889908 | Cpe03g00914 | Cpe-Chr3:5911448 | 4.84E-169 | tandem | |
Cpe12g00773 | Cpe-Chr12:7020793 | Cpe03g00913 | Cpe-Chr3:5889908 | 8.32E-124 | wgd | |
Cpe02g01619 | Cpe-Chr2:13561534 | Cpe03g00913 | Cpe-Chr3:5889908 | 1.60E-134 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g00913 | K09753 | - | csv:116401652 | 472.626 |