Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00913 ATGCCGATCGATACCTCCTCTGCAGTTTCCGGCCAAATTGTGTGTGTCACCGGCGCTGGAGGCTTCATTGCTTCTTGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACTGTTCGAGGAACTGTTAGAAACCCAGATGATCAAAAGAATGCTCATTTGAAGCAATTGGATGGAGCTAATGAGCGTCTCTCTTTGTATAGCGCTGATCTTCTTGATTTTGAAAGCCTCAAAGCTGCTATTATGGGCTGCGATGGTGTCTTCCACACTGCCTCTCCGGTCACCGATGACCCCTGTGGAAATTATGTACAGAATTGGTATTGCTATGCCAAGACAATAGCAGAGCAGGCAGCATGGGCCGTGGCAGAAGAAAAAGGAGTGGATTTAGTAGTGGTGAACCCAATGTTGGTATTGGGGCCTCTATTGCAAGAGGGTGTGAATGCGAGCGTGGTTCATATAATGAAGTACTTGACAGGGTCAGCCAAGACATATGTAAATGCAGTTCAAGGATATGTTGATGTCAAGGATGTGGCCAAAGCCCATGTGTTGGTTTATGAAACTCCGTCAGCCTCAGGCAGATATATATGCGTTGAGAGCATGCTTCATCGTGGAGAATTGGTTGATGTTCTTGCTAAGTTGTTCCCTCAATATCCACTTCCAACCAAGTGTTCTGATGAGGTGAATCCCAGAAAGAAGCCTTATAAATACAGTGTTGAGAAATTGAAGTCATTGGGAATGGAGTTCACACCAATCAAACAATGCATATATGAAACAGTGAAGAGCTTACAAGAAAAGGGTCATCTTCCTCTGCCCTCCCAACTTCAGCATTGA 828 45.05 MPIDTSSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLKQLDGANERLSLYSADLLDFESLKAAIMGCDGVFHTASPVTDDPCGNYVQNWYCYAKTIAEQAAWAVAEEKGVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDVLAKLFPQYPLPTKCSDEVNPRKKPYKYSVEKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSQLQH 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5889908 5892023 - Cp4.1LG03g08880.1 Cpe03g00913 466630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00913 275 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 102 270 - -
Cpe03g00913 275 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 97 - -
Cpe03g00913 275 Pfam NAD(P)H-binding 18 131 IPR016040 -
Cpe03g00913 275 PANTHER CINNAMOYL-COA REDUCTASE 9 97 - -
Cpe03g00913 275 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 262 IPR036291 -
Cpe03g00913 275 CDD FR_SDR_e 14 244 - -
Cpe03g00913 275 Gene3D - 101 275 - -
Cpe03g00913 275 Gene3D - 4 100 - -
Cpe03g00913 275 PANTHER CINNAMOYL-COA REDUCTASE 102 270 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00913 Cpe-Chr3:5889908 Cpe03g00915 Cpe-Chr3:5924193 2.01E-75 dispersed
Cpe03g00913 Cpe-Chr3:5889908 Cpe03g00914 Cpe-Chr3:5911448 4.84E-169 tandem
Cpe12g00773 Cpe-Chr12:7020793 Cpe03g00913 Cpe-Chr3:5889908 8.32E-124 wgd
Cpe02g01619 Cpe-Chr2:13561534 Cpe03g00913 Cpe-Chr3:5889908 1.60E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00913 K09753 - csv:116401652 472.626