Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00914 ATGTCGATTGATACCTCTGCAGTTTCCGGCCAAATTGTGTGTGTCACCGGCGCTGGAGGCTTCATTGCTTCTTGGCTTGTAAAGCTTCTTCTCGAAAAGGGCTACACCGTTCGAGGAACTGTTCGAAACCCAAATGATCAAAAGAATGCTCATTTGAAGCACTTGGATGGAGCTAATGAGCGTCTGTCTCTGTTTCGAGCTGATCTTCTCGATTTTGAAAGCCTCAAAACAGCTATTATGGGCTGTGATGGTGTTTTCCACACTGCCTCTCCAATGACCGATGATCCCGAAAAGATGGAAGAAGCCATAATTGGGAGTAAGAATGTCATGACCGCCGCCGCAAAAGCAAAAGTTCGACGAGTGGTGTTCACATCATCCATCGGCGCCGTCTACATGAATCCTAACCGAAGCCCCGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCCAAGACAGTAGCAGAGCAGGCAGCATGGGCAGTGGCAGAAGAAAAAGGAGTGGATTTAGTAGTGGTGAACCCAATGTTGGTATTGGGGCCTCTATTGCAAGAGGCTGTGAATACGAGTGTGGTTCATATAATGAAGTATTTGACAGGGTCAGCCAAGACATATGTAAACGCAGTTCAAGGATATGTTGATGTTAGGGATGTGGCGGAAGCCCATGTCTTGGTTTATGAAACTCCTTCAGCTTCCGGCAGATATATATGTGTTGAGAGTATGCTTCACCGTGGAGAATTGGTTGATATTCTTGCAGAGTATTTTCCAGAGTATCCCCTCCCAACCAAGTGCTCTGATGAGGTGAATCCCAGAAAGAAGCCTTATAAATACAGTGTTGAGAAGCTGAAGTCATTGGGAGTGGAGTTCATACCAATCAAACAATGCATATATGAAACTGTGAGGAGCTTGCAAGAAAAGGGTCATCTTCCACTTCCCTCCAAACTTCAACAATGA 990 45.66 MSIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPNDQKNAHLKHLDGANERLSLFRADLLDFESLKTAIMGCDGVFHTASPMTDDPEKMEEAIIGSKNVMTAAAKAKVRRVVFTSSIGAVYMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTVAEQAAWAVAEEKGVDLVVVNPMLVLGPLLQEAVNTSVVHIMKYLTGSAKTYVNAVQGYVDVRDVAEAHVLVYETPSASGRYICVESMLHRGELVDILAEYFPEYPLPTKCSDEVNPRKKPYKYSVEKLKSLGVEFIPIKQCIYETVRSLQEKGHLPLPSKLQQ 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5911448 5912928 + Cp4.1LG03g08920.1 Cpe03g00914 466631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00914 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 324 - -
Cpe03g00914 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 316 IPR036291 -
Cpe03g00914 329 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
Cpe03g00914 329 PANTHER CINNAMOYL-COA REDUCTASE 8 324 - -
Cpe03g00914 329 CDD FR_SDR_e 13 299 - -
Cpe03g00914 329 Gene3D - 3 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01619 Cpe-Chr2:13561534 Cpe03g00914 Cpe-Chr3:5911448 2.31E-168 dispersed
Cpe03g00914 Cpe-Chr3:5911448 Cpe12g00773 Cpe-Chr12:7020793 1.99E-171 dispersed
Cpe17g00231 Cpe-Chr17:1492490 Cpe03g00914 Cpe-Chr3:5911448 5.51E-79 dispersed
Cpe03g00913 Cpe-Chr3:5889908 Cpe03g00914 Cpe-Chr3:5911448 4.84E-169 tandem
Cpe03g00914 Cpe-Chr3:5911448 Cpe03g00915 Cpe-Chr3:5924193 2.67E-90 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00914 K09753 - csv:116401668 580.096