Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00915 ATGATGTCATTTGTTGTGTTCCATTCTACTCTCGATTTGGCTCTTCATCAATCCCTTCTCTCACCCACTCTTAACGTCCTCAATTATACCATTCCCACCAATCCCAAAATGACCCTCCCCGCCGTCGTAGCTTCCGCCCAAACTGTTTGTGTCACCGGCGCCGGTGGCTTCATTGCCTCTTGGCTCGTGAAGCTTCTTCTCCAAAAGGGTTACACTGTTAGAGGCACAGTAAGAAACCCAGATGATCCGAAGAATGCTCATTTGAAAGAGTTGGATGGAGCTGAGGAAAAGCTGAAGTTGTATGGTGCTGATCTTCTTGATTTTGAGAGCCTTAAAGCCGCCATTATCGGTTGCGATGGTGTCTTCCACACGGCGTCTGCGGTGACCGATGACCCAGAAAAAGTGGAGGAGACAATAATTGGGACAAAGAATGTTATATTGGCAGCAGCGGAGGCTAAGGTCCGGCGAATAGTGTTCACATCATCCATCGGAACGGTATACATGAACCCTAATAGAAGCCCCGACATGATAGTTGATGAGTCTTGTTGGAGTGACCTTGACTTTTGTAAAAATACAGAGAACTGGTATTGTTATGCAAAGACAGTTGCAGAGCAAACAGCATGGGCAATGGCGGCGGAGAAAGGGGTGGATCTAGTAGTGTTGAATCCCACGTTGGTACTTGGACCATTATTACAAGCAACAATAAATGCAAGTGTAGCTCATATAATGAAGTACTTGACTGGTGTTGTCAAGACATACGTGAATGCCTTTCAAGGTTATGTTCATGTTAAGGATGTTGCCAAATCTCATTTTTGTGGAAACATTGGACAGAACTGGTATTGTTATGCAAAGACAGTTGCAGAGCAAACAGCATGGGCAATGGCGGCGGAGAAAGGGGTGGATCTAGTAGTGTTGAATCCCACGTTGGTACTTGGACCATTATTACAAGCAACAATAAATGCAAGTGTAGCTCATATAATGAAGTACTTGACTGGTGTTGTCAAGACATACGTGAATGCCTTTCAAGGTTATGTTCATGTTAAGGATGTTGCCAAATCTCATGTCTTGTTGTATGAGACTCCTTCTGCTTTTGGTCGATACATTTGTATTGAAACTATGCTTCATCGACAAGAGTTGGTTGAAATTTTGGCTAAGTGTTCGGACCAAGTGAACCCTAGAAAGAAGCCTTACAAATATAGCGTCAAAAAGCTGAAGGAGTTGGGCATGGAGTTCATACCTGTGAAGCAATGCATCTACGAAACTGTGAAGAGCCTTCAAGAGAAGGGTCATCTTCCATTACCAACCCATTCTTAA 1314 43.91 MMSFVVFHSTLDLALHQSLLSPTLNVLNYTIPTNPKMTLPAVVASAQTVCVTGAGGFIASWLVKLLLQKGYTVRGTVRNPDDPKNAHLKELDGAEEKLKLYGADLLDFESLKAAIIGCDGVFHTASAVTDDPEKVEETIIGTKNVILAAAEAKVRRIVFTSSIGTVYMNPNRSPDMIVDESCWSDLDFCKNTENWYCYAKTVAEQTAWAMAAEKGVDLVVLNPTLVLGPLLQATINASVAHIMKYLTGVVKTYVNAFQGYVHVKDVAKSHFCGNIGQNWYCYAKTVAEQTAWAMAAEKGVDLVVLNPTLVLGPLLQATINASVAHIMKYLTGVVKTYVNAFQGYVHVKDVAKSHVLLYETPSAFGRYICIETMLHRQELVEILAKCSDQVNPRKKPYKYSVKKLKELGMEFIPVKQCIYETVKSLQEKGHLPLPTHS 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5924193 5928329 - Cp4.1LG03g08840.1 Cpe03g00915 466632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00915 437 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 270 433 - -
Cpe03g00915 437 Pfam NAD dependent epimerase/dehydratase family 49 270 IPR001509 -
Cpe03g00915 437 Pfam NAD dependent epimerase/dehydratase family 278 362 IPR001509 -
Cpe03g00915 437 PANTHER CINNAMOYL-COA REDUCTASE 270 433 - -
Cpe03g00915 437 PANTHER CINNAMOYL-COA REDUCTASE 44 271 - -
Cpe03g00915 437 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 44 271 - -
Cpe03g00915 437 Gene3D - 273 437 - -
Cpe03g00915 437 Gene3D - 41 272 - -
Cpe03g00915 437 CDD FR_SDR_e 49 408 - -
Cpe03g00915 437 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 47 270 IPR036291 -
Cpe03g00915 437 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 276 426 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00913 Cpe-Chr3:5889908 Cpe03g00915 Cpe-Chr3:5924193 2.01E-75 dispersed
Cpe03g00915 Cpe-Chr3:5924193 Cpe12g00773 Cpe-Chr12:7020793 2.57E-63 dispersed
Cpe03g00914 Cpe-Chr3:5911448 Cpe03g00915 Cpe-Chr3:5924193 2.67E-90 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00915 K09753 - csv:101219069 411.379