Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00945 ATGGAGTTGGTAACCGAGAAGAAGGATTTTGATTCTGCAAACGACAACAACAAGCTTAACTCTGCTCAAGCAGTTCTTGATTCTTCTTATCCTCCCTCAGTCGCTGCGGATGAAACTGGTAGTAATAACAATTCCAAAGAAGCTGAAGATTTGAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCCAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGTCGATTTTGGGAAGATTTGGTTCTCGCATTAGTGGGGGACCAGCTTGATTTCGGTGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAATGAGGATATTTTGAGTGTCTGGAACCGCAATGCATCTGATCATCAGGCAGTGATGGGTCTGCGAGATTCGATCAAACGACACTTAAAGCTCCCACATGGGTATGTTATGGAATACAAACCCCACGATGCATCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGTGA 636 44.97 MELVTEKKDFDSANDNNKLNSAQAVLDSSYPPSVAADETGSNNNSKEAEDLSERVARDLKDGLHPLKVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6972097 6983856 - Cp4.1LG03g09470.1 Cpe03g00945 466662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00945 211 ProSitePatterns Eukaryotic initiation factor 4E signature. 89 112 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cpe03g00945 211 Gene3D RNA Cap, Translation Initiation Factor Eif4e 36 209 IPR023398 -
Cpe03g00945 211 PANTHER BNAA10G16710D PROTEIN 68 211 - -
Cpe03g00945 211 SUPERFAMILY eIF4e-like 68 207 IPR023398 -
Cpe03g00945 211 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 68 211 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cpe03g00945 211 Pfam Eukaryotic initiation factor 4E 67 191 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cpe03g00945 211 MobiDBLite consensus disorder prediction 15 42 - -
Cpe03g00945 211 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00945 Cpe-Chr3:6972097 Cpe20g00489 Cpe-Chr20:2828156 1.54E-25 dispersed
Cpe03g00945 Cpe-Chr3:6972097 Cpe17g00212 Cpe-Chr17:1370438 1.71E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00945 K03259 - csv:101204290 377.867