Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00956 ATGTCGCGGGAGGAAAATGTTTACATGGCCAAGTTGGCCGAACAGGCAGAACGATATGAGGAAATGGTTGAGTTCATGGAGAAAGTTGCAAAGACAGTGGATGTCGAGGAGATGACCGTTGAGGAGAGGAATCTCCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGAAGGGCCTCATGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTCGAGGAAATGAGGACCATGTCGCAATTATCAAGGATTACCGTAGCAAAATTGAGACTGAACTGAGCAAGATCTGTGATGGGATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCAGCCTCATCTGCTGAGTCCAAGGTGTTTTATCTCAAAATGAAAGGTGATTACCACAGGTACCTTGCTGAGTTTAAGACTGGAGCTGAAAGGAAAGAAGCAGCTGAGAGCACACTGTTAGCCTACAAGTCTGCTCAGGATATTGCTCTTGCTGAATTGGCTCCTACTCATCCAATTAGGCTCGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGACCGTGCTTGCAATTTGGCAAAGCAGGCTTTTGACGAAGCAATTTCTGAGCTCGACACATTGGGTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACCCTTTGGACTTCTGATATTGGGGATGAAGCTGGCGATGAGATTAAGGAAGCATCGAAACGTGAATCAGGGGAGGGCGGACAGTAG 774 45.99 MSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEEMTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRSKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRESGEGGQ 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7368376 7370885 - Cp4.1LG03g15500.1 Cpe03g00956 466673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00956 257 Coils Coil 9 29 - -
Cpe03g00956 257 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Cpe03g00956 257 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Cpe03g00956 257 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Cpe03g00956 257 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Cpe03g00956 257 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Cpe03g00956 257 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Cpe03g00956 257 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Cpe03g00956 257 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Cpe03g00956 257 PIRSF 14-3-3 1 245 IPR000308 -
Cpe03g00956 257 Pfam 14-3-3 protein 9 233 IPR023410 -
Cpe03g00956 257 Gene3D - 1 246 IPR036815 -
Cpe03g00956 257 PANTHER 14-3-3-LIKE PROTEIN GF14-F 2 252 - -
Cpe03g00956 257 SUPERFAMILY 14-3-3 protein 1 235 IPR036815 -
Cpe03g00956 257 PANTHER 14-3-3 PROTEIN 2 252 IPR000308 -
Cpe03g00956 257 SMART 1433_4 3 246 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00956 Cpe-Chr3:7368376 Cpe07g00142 Cpe-Chr7:797418 7.35E-162 dispersed
Cpe11g00491 Cpe-Chr11:2844411 Cpe03g00956 Cpe-Chr3:7368376 9.58E-120 dispersed
Cpe02g01379 Cpe-Chr2:12113181 Cpe03g00956 Cpe-Chr3:7368376 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00956 K06630 - csv:101222068 488.804