Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00975 ATGAAACTGACAGTTTGGTATATTTGTCAAATTGGATGCCAAAATTCTCAGTGGGCTCTCACAAAGCTTTCGTCTCCACTTCTCAAAACGACTTGCCAAGTGAGCAAACGGCCCTCGGCTTTCTTCTTCTCCGCGTTTTCCCTTTTTTTTTTTTCTCTGATTCTTGGAGTCCGAAAAAGCTTAAAACCCACGAACCCAGAACCAGAGTTTTGTACCGTAGCGACGATTATGGCTGTACCCATTTACAGATTACCTTCTCTCTTTGCCCTTCTCGCCATATTTGTTGCCTTCTCCACCTTTCTTGCTTCCACAGAAGCATATGACCCACTTGATCCAAATGGAAACGTTACTGTCAAATGGGATGTTATAAACTGGACTCCTGATGGCTATGTTGCTGTGGTTACTCTGTACAATTTCCAACAATATCGTCATATTCAAGCACCGGGATGGTCTCTGCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAGCATGTTGGGAGGCCAAACAACAGAGCAAGGTGATTGTTCTAGATATAAAGGCAACATCCCTCATTGCTGCAAGAGGGATCCGACCGTTGTCGATTTACTGCCCGGAACTCCTTATAACCAGCAGATTGCTAATTGCTGCAAAGGTGGAGTTCTCAACTCCTGGGTGCAAGATCCTGTTACTGCAGTGAGCTCATTTCAGCTCAGTGTTGGTGCTGCTGGAACCTCGAATAAAACTGTTCGTCTGCCGAAGAACTTCACCCTAAAAGCACCCGGGCCTGGTTATACTTGTGGACCGGCAAAAATCGTTAAACCGAGTAAATTCATTTCAGCTGACAAACGGAGAGTTACACAGGCCTTGATGACATGGAATGTTACGTGCACATATTCGCAATTTCTGGCTCAAAAAACTCCGACTTGCTGTGTTTCACTGTCGTCGTTTTACAACGATACAATTGTTTCTTGCCCAAAATGCTCCTGTGGCTGCCAAAGCAACTTGAATGATCCCCAAAGTTGTGTGGAGCCAAATTCTCTTCACTTGGCCTCCGTTGTTACGGGTGCTAGTTCTCGTTCTAGCAAGAACAATGTGGCACCTTTGGTTCAGTGTACCAGCCACATGTGCCCTATCCGAGTTCACTGGCATGTGAAGATCAACTATAAGGAGTACTGGCGTGTGAAGATCACGATTACAAATTTCAATTACGTGATGAACTATACAAATTGGAACTTAGTTGTCCAACATCCTAACTTCGACAATCTTACTCAGATTTTCAGCTTCAACTACAAGTCGATCAATCCATACGGAACGATAAATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAATGATTTACTCATGCAAGCAGGCCCGCTTGGCAACGTGCAGACGGAGTTACTTTTCCAGAAGGATCAATCGACTTTCACATTCGATAAGGGCTGGGCTTTCCCTCGAAGGATCTATTTCAATGGTGACAATTGTGTTATGCCTCCTCCAGAGGCCTATCCCTACTTACCGAACACAGGTTCTAAGCACGGTGTCTCGATGTTTACTATGTTGTTGCTGATTTCCTTGACTCTATTGTCCTTCCACCATTTGTTTACATAA 1596 44.42 MKLTVWYICQIGCQNSQWALTKLSSPLLKTTCQVSKRPSAFFFSAFSLFFFSLILGVRKSLKPTNPEPEFCTVATIMAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNVTVKWDVINWTPDGYVAVVTLYNFQQYRHIQAPGWSLQWKWAKKEVIWSMLGGQTTEQGDCSRYKGNIPHCCKRDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPSKFISADKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPKCSCGCQSNLNDPQSCVEPNSLHLASVVTGASSRSSKNNVAPLVQCTSHMCPIRVHWHVKINYKEYWRVKITITNFNYVMNYTNWNLVVQHPNFDNLTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFQKDQSTFTFDKGWAFPRRIYFNGDNCVMPPPEAYPYLPNTGSKHGVSMFTMLLLISLTLLSFHHLFT 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7848729 7851798 + Cp4.1LG03g15350.1 Cpe03g00975 466692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00975 531 PANTHER COBRA-LIKE PROTEIN 84 527 - -
Cpe03g00975 531 PIRSF COBRA 79 530 IPR006918 GO:0010215|GO:0031225
Cpe03g00975 531 Pfam COBRA-like protein 130 293 IPR006918 GO:0010215|GO:0031225
Cpe03g00975 531 PANTHER PROTEIN COBRA 84 527 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01399 Cpe03g00975 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01400 Cpe-Chr2:12225363 Cpe03g00975 Cpe-Chr3:7848729 0 dispersed
Cpe03g00975 Cpe-Chr3:7848729 Cpe04g01449 Cpe-Chr4:11570360 0 dispersed
Cpe01g00487 Cpe-Chr1:2811379 Cpe03g00975 Cpe-Chr3:7848729 2.82E-166 transposed
Cpe02g01399 Cpe-Chr2:12223631 Cpe03g00975 Cpe-Chr3:7848729 0 wgd
Cpe20g00086 Cpe-Chr20:461896 Cpe03g00975 Cpe-Chr3:7848729 1.43E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00975 - - cmos:111457618 1037.71