Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00991 ATGAAGTCCCAGATGAACAACAACTTCTCTACCTCTCTTCTTCTCACAATCTTCTTCTACATCTCTCCATCTCTTGGCACATACAAAGATTGCTCCCTCGTGTTCAATTGTGGGAAGATCGTCGACGTTGGCTTCCCTTTCTGGGGCGAAGATCGTCCGCCAAGCTGCGGAGTTCCTAAATTGAAACTCACCTGTAAAGATAACGTGGATCCGAGTAAAAAAACGCTCAAGATCGCACGAGACGACTATTTCGATGGCATCTGCCCAGAAACTCGTCTTAAGAACACGACCCTGAACCCGAATCTCTTGGAAATGGGGAATGGGTACGTGAATCTAACACTGCTTTATGGTTGCGATTCACCTCTTATGGTGGTTCCTGACCATTTGAGATTCGAGTGTCCCGTCCATGGAGATGGGTGCGTGAAGCTTGGGGAGGAAATGGGGCTATGGGGCTGCAAGGACAGCGTTGTGGTTCCTATTCGTGGCGATGAGGGGCTTTTGGTTGGAGTTTCCAAGATGGAAGAAGCCATTAGAGAAGGGTTTGAGGTGAAATGGAAGGTGGATAGCGGTGGTTGTGGTGGTGATTGTGTGGAGTCCGGTGGCGTTTGTGGTTATGATTTGAAGCTCCGCCGTGGGATATGTTTCTGTGAGAATGGTGTTTCTTCTTCTTCTTCAGCTGATGTTTGCCGGAAGGACGGTGGCGCCTCCGTCCACCAGGCGTCAGGCTCTGCGGCCAAGACAGGTGGGAGTGAATCCAAGAAAAAACACTTAATAATAGGCCTTTGTGTTGGAGGGGCAACTTTACTAGGCTTATGCCTAGGATGCTTTGTCTTCTGCATTACACAACGAAATAAAGAACATGTTCGTCCCAAGTTGAAAAGCAAGGATCTTGCTTCGCCTCCTTCAACTGCACCTATTCTGATTCCCTCGACGTTTCGCTCTAATACCATTCCTTCTTATCCTTATTCGAGATCCGATCTCGAGAACGGGAGCTCCTACTTCGGAGCTCAACTCTTTACCTATGATGAACTTGAGGAAGCAACTCATAATTTTGATCCTTCAAAGGAGCTTGGAGATGGAGGTTATGGTACTGTTTACTTTGGAACACTCAAGGATGGACGGATGGTTGCAGTAAAGCGTCTATACGAAAACAACTATAAACGTGTCGAACAATTCATGAACGAATGCTATCAACTAACCAGTAAGAGTGACGTGTATAGCTTTGGAGTCGTTTTGATTGAGCTGATATCGTCACTGCAGGCAGTTGATATCAATAGGAATAGAAATGATATCAATTTGTCGAATATGGCTATTGATAGAATTCAAAAGCATAGTTTGGGTGATTTAGTAGAACCGGATCTCGGGTTTGAGAGGGATTATGTTGTAAGGTCTATGATAACGTCAGTGGCTGAGTTGGGTTTTCGATGTCTTCAACAAACAAGGGATGTGAGGCCTTCTATGGATGAAGTACTGCAAGCTCTGAGAGAAATAGGGAAAGAAGTGCTAGATATTGGTAATGAT 1521 45.56 MKSQMNNNFSTSLLLTIFFYISPSLGTYKDCSLVFNCGKIVDVGFPFWGEDRPPSCGVPKLKLTCKDNVDPSKKTLKIARDDYFDGICPETRLKNTTLNPNLLEMGNGYVNLTLLYGCDSPLMVVPDHLRFECPVHGDGCVKLGEEMGLWGCKDSVVVPIRGDEGLLVGVSKMEEAIREGFEVKWKVDSGGCGGDCVESGGVCGYDLKLRRGICFCENGVSSSSSADVCRKDGGASVHQASGSAAKTGGSESKKKHLIIGLCVGGATLLGLCLGCFVFCITQRNKEHVRPKLKSKDLASPPSTAPILIPSTFRSNTIPSYPYSRSDLENGSSYFGAQLFTYDELEEATHNFDPSKELGDGGYGTVYFGTLKDGRMVAVKRLYENNYKRVEQFMNECYQLTSKSDVYSFGVVLIELISSLQAVDINRNRNDINLSNMAIDRIQKHSLGDLVEPDLGFERDYVVRSMITSVAELGFRCLQQTRDVRPSMDEVLQALREIGKEVLDIGND 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8063917 8068043 + Cp4.1LG03g15210.1 Cpe03g00991 466708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00991 507 Pfam Wall-associated receptor kinase galacturonan-binding 31 78 IPR025287 GO:0030247
Cpe03g00991 507 ProSiteProfiles Protein kinase domain profile. 351 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00991 507 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Cpe03g00991 507 PANTHER - 15 395 - -
Cpe03g00991 507 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 396 502 IPR044652 -
Cpe03g00991 507 Pfam Wall-associated receptor kinase C-terminal 151 218 IPR032872 -
Cpe03g00991 507 Gene3D Phosphorylase Kinase; domain 1 325 404 - -
Cpe03g00991 507 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 395 IPR044652 -
Cpe03g00991 507 PANTHER - 396 502 - -
Cpe03g00991 507 SUPERFAMILY Protein kinase-like (PK-like) 316 399 IPR011009 -
Cpe03g00991 507 SUPERFAMILY Protein kinase-like (PK-like) 391 497 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00991 Cpe13g01140 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00991 Cpe-Chr3:8063917 Cpe13g01140 Cpe-Chr13:9070975 2.06E-37 dispersed
Cpe04g01393 Cpe-Chr4:11263862 Cpe03g00991 Cpe-Chr3:8063917 5.04E-19 dispersed
Cpe03g00991 Cpe-Chr3:8063917 Cpe02g01414 Cpe-Chr2:12308346 7.72E-153 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00991 - - cmax:111479894 741.495