Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g00994 ATGAAGCCAATGCCAACGGGCGTGCGCGTGGCGGGGCTTATGCGCGCACCGGCCCCAACTATCAGCGCCGCTTCTTCCCTCTTCCTCTTTCTCTACCTCTTCCTCTACCTCTCGTCCTCGTCGTTAGTGCTCGTCTTGTCTGCCCCATCCGACACCGAAACTCTGCTTGAATTCAAGCGCTCTTTGACCTCGGCCAGGGCTCTTAGAGATTGGAACCCCAAGGTCCCTCCTTGCAACAACAACAAGCCCAATTGGGCGGGCGTGCTGTGTTTGAATGGCCATGTTAGAGGGCTGCGGCTTGAGAATATGGGGCTTAAGGGGGAGGTTAATGTGGATCCCTTGGTTTATCTGTCTCGTATGCGCACCCTGAGCTTCATGAACAATACCTTGGTTGGGCCTTGGCCTTCTGTTATTGGCAAACTACGCAATCTACGCTCCGTTTATCTTTCCTATAACCATTTTTCTGGTGCAATCCCGGACGATGCCTTCACGGGTATGAAATTTTTGAAGAAAGTGTTTTTGACCAATAATGAATTCAACGGCCAAATTCCCTCATCTCTCGCTTCCCTGTCTAGGCTTATGGAATTGAGACTTGATGGAAACAAATTCAGAGGCCAAGTCCCCCGTCTTGAAATGCCTTCTTTGAAGAAACTTAATGTTTCCAACAATGAATTGGAAGGCCCAATTCCTCGTAACCGTGATCTGTGTGGGGATCCATTTCCAGAATGCGAGAGAGCCCTAATTTCATCAGCAGGGCTACTCAAAATCGCAGTGATAGTCATAATTTTGGGGGTAACATTAGCAGTAATAGCTGCAATTTTCATCATAATGAATTTAAGGAGGCAGCCCGCCTTGCAATTAGGGAAGGGGAATCCCGGCGTTATAGAAGAGGATCAGAACAAATACATGAGTTCTAAGCCAACCACGGCGGTGGTTGGCGATGGATACAGATCGACGGAGTCGTCCGTAGCGCAGGCTAAAAGAGGCGCAGAACATGGGAAGCTATTATTTGTGAGAGACGACAGGGAGAAATTCGACTTACAAGACCTCCTCAGAGCATCCGCCGAAATCCTGGGCAGTGGCTCATTCGGCTCTTCCTACAAAGCAACAATACTCTGTAACGCCGTGGTTGTTAAGCGATACAAGCATATGAACAACGTAGGGAGAGAAGAGTTTCATGAACACATGAGACGCCTCGGCCGGTTGACGCATCCAAATCTACTCCCCTTGGTTGCTTATTACTACAGAAAAGAAGAGAAGCTCTTGATTTCGGATTTTGTAGATGAAGGGAGTTTGGCGAGCCATCTGCACGGCAACCACAACCTGGAGGAGCCAGGGATTGATTGGGCTACAAGATTGAAGATAATCAGAGGAATAGCAAGAGGAATGTCGTACCTCTACACATCGCTGCCAAGCATAGTAGCACCACACGGACATCTGAAATCATCAAATGTGCTGCTAGACGAGTCGTTAGAGCCTCTGCTTACGGATTACGGGCTAATCCCTGTGGCTAATGTAGAGCATGGACAGACATTAATGATGGCTTACAAATCACCCGAATACGCTCATCTCGGCCGTATAAGCAAGAAAACTGACGTATGGAGCTTCGGAATTCTGATACTGGAAATGCTAACAGGTAGGTTCCCAGAGAACTACCTGACACGAAATCACGACACGAAATCAGACCTAGCCACTTGGGTAAACAACATGATCAAGGAAAAGAAAACGTCGCTAGTGTTCGATGCAGAGCTAGGGCGAGCTAGGGAGAGCAACAAAGGCGAGCTGCTGAAGATGCTGAAGATTGCGTTGAGTTGCTGCGAGGAAGACGTGGAGAGAAGGCTGGATTTGAATCAGGTAGTGGCCCAAATTGAAGATCTGAACGACGCTGATTTGAGCGATAACGATGGAGATAACTTCGCTTCCACATCTCGCAACTCTCAAATGCCTGTTTGA 1953 48.34 MKPMPTGVRVAGLMRAPAPTISAASSLFLFLYLFLYLSSSSLVLVLSAPSDTETLLEFKRSLTSARALRDWNPKVPPCNNNKPNWAGVLCLNGHVRGLRLENMGLKGEVNVDPLVYLSRMRTLSFMNNTLVGPWPSVIGKLRNLRSVYLSYNHFSGAIPDDAFTGMKFLKKVFLTNNEFNGQIPSSLASLSRLMELRLDGNKFRGQVPRLEMPSLKKLNVSNNELEGPIPRNRDLCGDPFPECERALISSAGLLKIAVIVIILGVTLAVIAAIFIIMNLRRQPALQLGKGNPGVIEEDQNKYMSSKPTTAVVGDGYRSTESSVAQAKRGAEHGKLLFVRDDREKFDLQDLLRASAEILGSGSFGSSYKATILCNAVVVKRYKHMNNVGREEFHEHMRRLGRLTHPNLLPLVAYYYRKEEKLLISDFVDEGSLASHLHGNHNLEEPGIDWATRLKIIRGIARGMSYLYTSLPSIVAPHGHLKSSNVLLDESLEPLLTDYGLIPVANVEHGQTLMMAYKSPEYAHLGRISKKTDVWSFGILILEMLTGRFPENYLTRNHDTKSDLATWVNNMIKEKKTSLVFDAELGRARESNKGELLKMLKIALSCCEEDVERRLDLNQVVAQIEDLNDADLSDNDGDNFASTSRNSQMPV 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8138764 8142549 + Cp4.1LG03g15160.1 Cpe03g00994 466711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g00994 650 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 23 633 - -
Cpe03g00994 650 Pfam Leucine rich repeat 142 203 IPR001611 GO:0005515
Cpe03g00994 650 Gene3D Ribonuclease Inhibitor 46 237 IPR032675 -
Cpe03g00994 650 Gene3D Phosphorylase Kinase; domain 1 317 426 - -
Cpe03g00994 650 SUPERFAMILY Protein kinase-like (PK-like) 356 625 IPR011009 -
Cpe03g00994 650 MobiDBLite consensus disorder prediction 634 650 - -
Cpe03g00994 650 SUPERFAMILY L domain-like 75 231 - -
Cpe03g00994 650 Pfam Protein tyrosine and serine/threonine kinase 356 622 IPR001245 GO:0004672|GO:0006468
Cpe03g00994 650 Pfam Leucine rich repeat N-terminal domain 49 90 IPR013210 -
Cpe03g00994 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 633 - -
Cpe03g00994 650 ProSiteProfiles Protein kinase domain profile. 352 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g00994 650 MobiDBLite consensus disorder prediction 631 650 - -
Cpe03g00994 650 Gene3D Transferase(Phosphotransferase) domain 1 427 645 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00994 Cpe-Chr3:8138764 Cpe04g01354 Cpe-Chr4:11044069 0 dispersed
Cpe02g01768 Cpe-Chr2:14373468 Cpe03g00994 Cpe-Chr3:8138764 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62291 PF07714 PK_Tyr_Ser-Thr 2.40E-30 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g00994 - - csv:101203276 996.497