Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g01013 | ATGGAGCCGTCTCATCAACTTTCACAAGCGCCCGAGGAGATTATTCTACGCTGGGACTCAGCTGCGCCGGAGGAACTGAAGGATAAGATGATTTTTGACTCAGATAGGGAAGAGATCGACCGATACTTGCAGGCCGTCGATGAAATCCAGAGGTCTATGTCGTCGGCTTCCATTTCCGACGATCAGAACAAAGTCGATTCCACTATGCAGATCGCTATGGCCAGGCTTGAGGATGAGTTCCGTTACATTCTGTCTAGTCATACCACTCCAATCGAGGTTGAGTCGCTTACTGATCCGAGTTCCTCTTCTCGCTCTATGTCCACTACTGAGAGTTGTGTATTCGAGGATGAAAACGACGAGGAAGCGGATTCGCAGGAAGTTCAGCTTGATTTAAGTAGCAGTAGCAGTCCAAGGTTTGGGTCAAGTGGCCGATCGAGCTATCGGGCGATGAGTAGTATTCGTGAAATTGATCTGATACCTTCGGATGCGATTATCGATCTACGAAGTATTGCTGAGCGGATGATTACGGCGGGGTACCTGCGCGAGTGCATCCAAGTCTATGGCAGTGTGCGAAAGTCCACCTTCGACTCCAGCTTCCGACGTCTCGGAATTGAGAAACTGAGCATTGGAGATATCCAGAGGCTGGACTGGAATGAGCTGGAGATGAAGATCAGGAGGTGGATTAAAGCAGCAAAGGTTTCTATTAGGACCTTGTTTGCCAGTGAGAAGAAGCTCTGCGAGCAAATCTTTTATGGCATAGGGACAGCCATAGACGATGCTTGTTTCATGGAGACTGTAAAGGGCCCCGTGGTTCAGTTGTTCAATTTCGCCGAAGCGATCAGTATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTAACGGATTTGATACCTGACATCGATGTGATATTCGATTCAAAATCAGCGGAATATATTCGGATTCAGACGGCGGAGATATTGTCGCGGTTGGCGGAGGCCGTCAGAGGGACTTTGTCGGAGTTTGAAAACGCGGTGATGCGAGATCCGTCTCTGCAGCCGGTTCCCGGTGGGACGCTTCATCCGTTGACAAGGTATGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACGTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTACTCGGCCGACCCCACAACCCCAGATATGGACTTCGCTGAGCTAGAGGGTAAAACGCCATTAGCGCTCCATCTTATATGGAGCATCGTGGTTCTGCAGTTCAATTTGGAGGGAAAGTCCAGGCACTACAGAGACCCTTCTCTAGCTCACCTATTCATTATGAACAACGTTCATTACATTGTTCAGAAGATAAAATTATCCCCAGAATTGCGAGAAATGATCGGAGACGTTTATCTGAAAAGGCTGACCGGGAAGTTCCGACGGGCGGCGACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTGCGAAACGAAGGGTTGAATGTGGGCGGGAGCTTGTCTTCCGGCCCCGCAAAGAGCCTTATTAGAGAAAGATTCAAGACTTTCAATGCCATGTTTGAGGAGGTTCACAGGACACAATCAGCATGGTTGATACCAGACTCTCAGCTGAGGGAGGAGCTTCGCATATCCATAACTGAAAAGTTGATCCCAGCTTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAAGCACCCGGAAAATTACATCAAGTACTCGGTCGAGGAACTGGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCAGTAACCCATAACTTGAGAAGGAGATCCCACTGA | 1839 | 49.05 | MEPSHQLSQAPEEIILRWDSAAPEELKDKMIFDSDREEIDRYLQAVDEIQRSMSSASISDDQNKVDSTMQIAMARLEDEFRYILSSHTTPIEVESLTDPSSSSRSMSTTESCVFEDENDEEADSQEVQLDLSSSSSPRFGSSGRSSYRAMSSIREIDLIPSDAIIDLRSIAERMITAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELEMKIRRWIKAAKVSIRTLFASEKKLCEQIFYGIGTAIDDACFMETVKGPVVQLFNFAEAISISRRSPEKLFKILDLHDALTDLIPDIDVIFDSKSAEYIRIQTAEILSRLAEAVRGTLSEFENAVMRDPSLQPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPTTPDMDFAELEGKTPLALHLIWSIVVLQFNLEGKSRHYRDPSLAHLFIMNNVHYIVQKIKLSPELREMIGDVYLKRLTGKFRRAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRERFKTFNAMFEEVHRTQSAWLIPDSQLREELRISITEKLIPAYRSFLGLHGHHIESGKHPENYIKYSVEELENAILDFFEGCSVTHNLRRRSH | 612 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8277352 | 8279190 | - | Cp4.1LG03g14970.1 | Cpe03g01013 | 466730 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g01013 | 612 | MobiDBLite | consensus disorder prediction | 93 | 112 | - | - | |
Cpe03g01013 | 612 | SUPERFAMILY | Cullin repeat-like | 25 | 599 | IPR016159 | - | |
Cpe03g01013 | 612 | MobiDBLite | consensus disorder prediction | 93 | 145 | - | - | |
Cpe03g01013 | 612 | MobiDBLite | consensus disorder prediction | 127 | 145 | - | - | |
Cpe03g01013 | 612 | Gene3D | Exocyst complex component Exo70 | 14 | 117 | - | - | |
Cpe03g01013 | 612 | Gene3D | Exocyst complex component Exo70 | 118 | 608 | - | - | |
Cpe03g01013 | 612 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 9 | 611 | IPR004140 | GO:0000145|GO:0006887 | |
Cpe03g01013 | 612 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 9 | 611 | - | - | |
Cpe03g01013 | 612 | Pfam | Exo70 exocyst complex subunit | 226 | 595 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g01013 | Cpe-Chr3:8277352 | Cpe09g00962 | Cpe-Chr9:8594080 | 1.54E-154 | dispersed | |
Cpe10g00315 | Cpe-Chr10:1826990 | Cpe03g01013 | Cpe-Chr3:8277352 | 7.84E-114 | dispersed | |
Cpe19g00379 | Cpe-Chr19:3404478 | Cpe03g01013 | Cpe-Chr3:8277352 | 2.95E-06 | dispersed | |
Cpe19g00500 | Cpe-Chr19:4278763 | Cpe03g01013 | Cpe-Chr3:8277352 | 6.54E-98 | dispersed | |
Cpe20g00789 | Cpe-Chr20:7077959 | Cpe03g01013 | Cpe-Chr3:8277352 | 1.34E-102 | dispersed | |
Cpe03g01013 | Cpe-Chr3:8277352 | Cpe02g01761 | Cpe-Chr2:14340568 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g01013 | K07195 | - | csv:101204229 | 1096.65 |