Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01013 ATGGAGCCGTCTCATCAACTTTCACAAGCGCCCGAGGAGATTATTCTACGCTGGGACTCAGCTGCGCCGGAGGAACTGAAGGATAAGATGATTTTTGACTCAGATAGGGAAGAGATCGACCGATACTTGCAGGCCGTCGATGAAATCCAGAGGTCTATGTCGTCGGCTTCCATTTCCGACGATCAGAACAAAGTCGATTCCACTATGCAGATCGCTATGGCCAGGCTTGAGGATGAGTTCCGTTACATTCTGTCTAGTCATACCACTCCAATCGAGGTTGAGTCGCTTACTGATCCGAGTTCCTCTTCTCGCTCTATGTCCACTACTGAGAGTTGTGTATTCGAGGATGAAAACGACGAGGAAGCGGATTCGCAGGAAGTTCAGCTTGATTTAAGTAGCAGTAGCAGTCCAAGGTTTGGGTCAAGTGGCCGATCGAGCTATCGGGCGATGAGTAGTATTCGTGAAATTGATCTGATACCTTCGGATGCGATTATCGATCTACGAAGTATTGCTGAGCGGATGATTACGGCGGGGTACCTGCGCGAGTGCATCCAAGTCTATGGCAGTGTGCGAAAGTCCACCTTCGACTCCAGCTTCCGACGTCTCGGAATTGAGAAACTGAGCATTGGAGATATCCAGAGGCTGGACTGGAATGAGCTGGAGATGAAGATCAGGAGGTGGATTAAAGCAGCAAAGGTTTCTATTAGGACCTTGTTTGCCAGTGAGAAGAAGCTCTGCGAGCAAATCTTTTATGGCATAGGGACAGCCATAGACGATGCTTGTTTCATGGAGACTGTAAAGGGCCCCGTGGTTCAGTTGTTCAATTTCGCCGAAGCGATCAGTATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTAACGGATTTGATACCTGACATCGATGTGATATTCGATTCAAAATCAGCGGAATATATTCGGATTCAGACGGCGGAGATATTGTCGCGGTTGGCGGAGGCCGTCAGAGGGACTTTGTCGGAGTTTGAAAACGCGGTGATGCGAGATCCGTCTCTGCAGCCGGTTCCCGGTGGGACGCTTCATCCGTTGACAAGGTATGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACGTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTACTCGGCCGACCCCACAACCCCAGATATGGACTTCGCTGAGCTAGAGGGTAAAACGCCATTAGCGCTCCATCTTATATGGAGCATCGTGGTTCTGCAGTTCAATTTGGAGGGAAAGTCCAGGCACTACAGAGACCCTTCTCTAGCTCACCTATTCATTATGAACAACGTTCATTACATTGTTCAGAAGATAAAATTATCCCCAGAATTGCGAGAAATGATCGGAGACGTTTATCTGAAAAGGCTGACCGGGAAGTTCCGACGGGCGGCGACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTGCGAAACGAAGGGTTGAATGTGGGCGGGAGCTTGTCTTCCGGCCCCGCAAAGAGCCTTATTAGAGAAAGATTCAAGACTTTCAATGCCATGTTTGAGGAGGTTCACAGGACACAATCAGCATGGTTGATACCAGACTCTCAGCTGAGGGAGGAGCTTCGCATATCCATAACTGAAAAGTTGATCCCAGCTTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAAGCACCCGGAAAATTACATCAAGTACTCGGTCGAGGAACTGGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCAGTAACCCATAACTTGAGAAGGAGATCCCACTGA 1839 49.05 MEPSHQLSQAPEEIILRWDSAAPEELKDKMIFDSDREEIDRYLQAVDEIQRSMSSASISDDQNKVDSTMQIAMARLEDEFRYILSSHTTPIEVESLTDPSSSSRSMSTTESCVFEDENDEEADSQEVQLDLSSSSSPRFGSSGRSSYRAMSSIREIDLIPSDAIIDLRSIAERMITAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELEMKIRRWIKAAKVSIRTLFASEKKLCEQIFYGIGTAIDDACFMETVKGPVVQLFNFAEAISISRRSPEKLFKILDLHDALTDLIPDIDVIFDSKSAEYIRIQTAEILSRLAEAVRGTLSEFENAVMRDPSLQPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPTTPDMDFAELEGKTPLALHLIWSIVVLQFNLEGKSRHYRDPSLAHLFIMNNVHYIVQKIKLSPELREMIGDVYLKRLTGKFRRAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRERFKTFNAMFEEVHRTQSAWLIPDSQLREELRISITEKLIPAYRSFLGLHGHHIESGKHPENYIKYSVEELENAILDFFEGCSVTHNLRRRSH 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8277352 8279190 - Cp4.1LG03g14970.1 Cpe03g01013 466730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01013 612 MobiDBLite consensus disorder prediction 93 112 - -
Cpe03g01013 612 SUPERFAMILY Cullin repeat-like 25 599 IPR016159 -
Cpe03g01013 612 MobiDBLite consensus disorder prediction 93 145 - -
Cpe03g01013 612 MobiDBLite consensus disorder prediction 127 145 - -
Cpe03g01013 612 Gene3D Exocyst complex component Exo70 14 117 - -
Cpe03g01013 612 Gene3D Exocyst complex component Exo70 118 608 - -
Cpe03g01013 612 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 611 IPR004140 GO:0000145|GO:0006887
Cpe03g01013 612 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 9 611 - -
Cpe03g01013 612 Pfam Exo70 exocyst complex subunit 226 595 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01013 Cpe-Chr3:8277352 Cpe09g00962 Cpe-Chr9:8594080 1.54E-154 dispersed
Cpe10g00315 Cpe-Chr10:1826990 Cpe03g01013 Cpe-Chr3:8277352 7.84E-114 dispersed
Cpe19g00379 Cpe-Chr19:3404478 Cpe03g01013 Cpe-Chr3:8277352 2.95E-06 dispersed
Cpe19g00500 Cpe-Chr19:4278763 Cpe03g01013 Cpe-Chr3:8277352 6.54E-98 dispersed
Cpe20g00789 Cpe-Chr20:7077959 Cpe03g01013 Cpe-Chr3:8277352 1.34E-102 dispersed
Cpe03g01013 Cpe-Chr3:8277352 Cpe02g01761 Cpe-Chr2:14340568 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01013 K07195 - csv:101204229 1096.65