Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01037 ATGGAGAAGAAGTGGAGCTGGAGAGAGCTGTTGCTGCTAATCAGTATCTGCATTTTGGGATGGAGGGTCAGTTTTATCAATGGAGCTACGGATCCAGGAGATGTCGCTGCTCTAAATGCCATGTATAGTAGTTTAAACTCGCCTCCAATTCTAACACTATGGAGTTCAAGTGGTGGCGATCCATGTGGACAAATATGGAAAGGCATTACTTGTGCAGGCTCAAGGGTCACAGAAATTTCATTGACTGGTTTAGGACTTTCTGGATCTTTGGGATACCAGCTCTCAAGTTTGGCATCTCTAATTAATCTAGATGTGAGTTCCAACAATCTTGGACCTGACATACCTTATCAACTCCCTCAGAACTTGCAAAAACTAAATCTTGGATGGAATAACTTCAGTGGAAGCATCCCGTATTCTCTTTCTCAAATGAGTTTGCTTATTTCCTTGAACATCAGCCACAATCAGCTTGGGAATGAAGTGAATGATATGTTTTGGAAGCTTTCTTCCTTGGCCATGTTGGATGTCTCTTTCAATTCTCTGTCAGGTGCCCTTCCCCAGAGTTTTAGCAACCTTACCAGTATGAATGCAATGTTTCTGCAAAACAACCAATTCAGTGGCACTATTGATGTTCTTGCAAATCTTCCACTACAAAATTTGAATGTCGAGAACAATCATTTTACAGGATGGGTTCCTGAACGATTGAAGAACATAAATATTCAGGAGGGTGGCAATTCTTGGAGCTTTGGGCTTGCACCCCCACCTCCACCTGGTACACCTCCAGCCAACCAAGATTACAGATATCACAAGCCGGGAAATATTTACAGCCCACTGAGTAGTCATGCTGCTGGTGGAGATAGCAGATCAGGTATCAGTGGTGGTGCCATTGCTGGAATTGCTATATCTGTGTTAGTGGTGGGAGCAGTAATAGCATACATGCTTGTAAAGAGAAGATCCAAAAGGTCTTCCTCAGACATAGACAAGCAAAAGCTTGGGAACTTGCCTATTGTATCTCCTGCTTCAAATGGAGTGCAAGAACAAATTCTCTTGAAAGATCCATTGGCAGAGATGAAGCTTGTTCATACTTCATCCTCATTTGATGCAAAATCATTGGATTCTCCTGCTTCAATCAATCTTAAGCCCCCACCTACTGATTCTCATAAATCATTTGATGACAATGATACATCAAAGATACCTGTAGTGAAGAAGACCATTGCCACCCCTCCGATAAGTGTGAGGTCATATTCAATAGCAGATCTTCAAATGGCTACGGGCAGTTTCGATGTAGAAAACCTTCTCGGTGAGGGATCGCTTGGACGGGTTTATCGGGCTCAGTTCGATGATGGGAAGGTTCTTGCCGTGAAGAAAATAGATTCAGCTGCCTTCCCTAGAGGATTGTTGGAAGATTTCACAGAGATAGTTGCTAATGTATCTCAGTTGCATCATCCCAATGTAACCGAGCTAATGGGTTATTGCTCAGAGCATGGCCTGCATTTGCTAATATATGAGTTCCATAAGAATGGCTCGCTACATGACTTTTTGCACATATCAGATGAATATAGCAAGCCACTGACCTGGAACTCCCGTGTCAAAATTGCTTTGGGGACGGCTCGTGCATTAGAGTACCTGCATGAAGTTTGTGCACCGTCAGTTGTTCACAGAAATATTAAGTCAGCCAATATCTTACTAGATGCTGAAATTAATCCTCATCTCTCTGATTGTGGCCTGGCTAGCTTTATAACCAATCTTGATCAGGCATTAGATCACCAGGTAGGATCTGGGTACAATGCCCCTGAGGTTACCATGTCTGGTCAATATACATTGAAGAGCGATGTATACAGCTTTGGAGTGGTTATGTTGGAACTTCTAAGCGGGCGTAAGCCATTTGATAGTTCAAGGCCAAGAGATGAGCAATCCTTGGTTCGATGGGCTACACCTCAGCTCCATGACATTGATGCCTTGACGAAAATGGTTGATCCTGCTCTTAAAGGGCTCTACCCAGTCAAGTCTCTCTCAAGATTTGCAGACGTTGTGGCTCTTTGCGTCCAGCCGGAGCCTGAATTTAGACCACCTATGTCAGAGGTGGTGGAATCCTTGGTTCGGCTTGTGCAGAGGTCCAACATGAGCAGAAGAACGTTTGGAAGTGATCATGGATCATCTTTTAGAACTGATGATCCTGATGCACGTGAGACATCTTAA 2196 43.62 MEKKWSWRELLLLISICILGWRVSFINGATDPGDVAALNAMYSSLNSPPILTLWSSSGGDPCGQIWKGITCAGSRVTEISLTGLGLSGSLGYQLSSLASLINLDVSSNNLGPDIPYQLPQNLQKLNLGWNNFSGSIPYSLSQMSLLISLNISHNQLGNEVNDMFWKLSSLAMLDVSFNSLSGALPQSFSNLTSMNAMFLQNNQFSGTIDVLANLPLQNLNVENNHFTGWVPERLKNINIQEGGNSWSFGLAPPPPPGTPPANQDYRYHKPGNIYSPLSSHAAGGDSRSGISGGAIAGIAISVLVVGAVIAYMLVKRRSKRSSSDIDKQKLGNLPIVSPASNGVQEQILLKDPLAEMKLVHTSSSFDAKSLDSPASINLKPPPTDSHKSFDDNDTSKIPVVKKTIATPPISVRSYSIADLQMATGSFDVENLLGEGSLGRVYRAQFDDGKVLAVKKIDSAAFPRGLLEDFTEIVANVSQLHHPNVTELMGYCSEHGLHLLIYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALEYLHEVCAPSVVHRNIKSANILLDAEINPHLSDCGLASFITNLDQALDHQVGSGYNAPEVTMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRDEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVESLVRLVQRSNMSRRTFGSDHGSSFRTDDPDARETS 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8458185 8465150 - Cp4.1LG03g14730.1 Cpe03g01037 466754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01037 731 Gene3D Ribonuclease Inhibitor 31 249 IPR032675 -
Cpe03g01037 731 MobiDBLite consensus disorder prediction 709 731 - -
Cpe03g01037 731 SUPERFAMILY Protein kinase-like (PK-like) 406 698 IPR011009 -
Cpe03g01037 731 Gene3D Phosphorylase Kinase; domain 1 388 503 - -
Cpe03g01037 731 Gene3D Transferase(Phosphotransferase) domain 1 505 721 - -
Cpe03g01037 731 MobiDBLite consensus disorder prediction 245 269 - -
Cpe03g01037 731 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 20 727 - -
Cpe03g01037 731 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Cpe03g01037 731 PANTHER OS01G0253100 PROTEIN 20 727 IPR045271 GO:0004714|GO:0006468
Cpe03g01037 731 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Cpe03g01037 731 ProSiteProfiles Protein kinase domain profile. 426 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01037 731 SUPERFAMILY L domain-like 30 236 - -
Cpe03g01037 731 CDD STKc_IRAK 432 701 - -
Cpe03g01037 731 MobiDBLite consensus disorder prediction 370 393 - -
Cpe03g01037 731 Pfam Protein tyrosine and serine/threonine kinase 428 698 IPR001245 GO:0004672|GO:0006468
Cpe03g01037 731 MobiDBLite consensus disorder prediction 716 731 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01037 Cpe-Chr3:8458185 Cpe13g00020 Cpe-Chr13:181595 0 dispersed
Cpe04g00762 Cpe-Chr4:7354179 Cpe03g01037 Cpe-Chr3:8458185 8.30E-169 dispersed
Cpe10g00833 Cpe-Chr10:4709935 Cpe03g01037 Cpe-Chr3:8458185 4.45E-101 dispersed
Cpe01g00878 Cpe-Chr1:5159423 Cpe03g01037 Cpe-Chr3:8458185 0 transposed
Cpe10g00173 Cpe-Chr10:1029944 Cpe03g01037 Cpe-Chr3:8458185 5.57E-46 transposed
Cpe12g00545 Cpe-Chr12:5586848 Cpe03g01037 Cpe-Chr3:8458185 0 wgd
Cpe17g00420 Cpe-Chr17:3144363 Cpe03g01037 Cpe-Chr3:8458185 0 wgd
Cpe02g01752 Cpe-Chr2:14286057 Cpe03g01037 Cpe-Chr3:8458185 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62292 PF07714 PK_Tyr_Ser-Thr 3.40E-41 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01037 - - csv:101208239 1259.59