Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01059 ATGATGGAAGAGATGTCTCCTGCTGTTTCTTTGACACTTAGTTTGGGCAATTCAAAGTCTGATAGTTCAGAAAGTCCTGGTCATGTCGAATACGCACGCCTAAAGTTGGTGACCGACACGGTAGGTTCGATTGGTAATGGTAGCTTCCATGATTTTAATGGTATAGTTGATGGCTTAACCGTGTCGCGCCCAACGGACAATGGTCAAGGTATAAACACGTTTTGGGGGTTGTTACCGAAGAACGGCACGAATTTGAGTGTAGATAAGGAAGATGCATTGTTATCTACTCTGGATTACCCTGATGAAATGATAGATGATGGATTGTTTGGTATTAATGGTGGTGTCAAAATTGGAGATGTTAGTAATGGTCATATTGTTGCTAAGGCTATCATCTTGGTCGAATCAGGGAATATCCCGACCAATGAACTTATTGTCGCGACCGTAAGCCCGGATTTAGAAGTATCTGCCTCGTCAGAGCTGCACGCCGCCCCTGCTGTAGTTTTCGAATCAAAAGGGGGGGATAGTGTTCATAAAGGCGTTCGTAGCGTCTTCGAACGTGATTGTATTCCGCTTTGGGGGTCGGTATCGATTTGTGGTAGAAGACCAGAAATGGAAGATGCAATTTCTTCTGTTCCTTGTTTTGCAAAGATTCCTATCAAAATGCTTGTAGGAAATGATTTGGTGAATGGAATTGGTCAAAGTTTAACGCATATCAACAGCCATTTTTTTGGTGTTTATGATGGACATGGGGGCCCTCAGGTTGCTGATTATTGTCGGGAGCGGATACACGTGGCGTTAGCTGAAGAGATAAGAGATTTTAAACAAGATCGAAATAATGGAAGCAATGGAGAGAATTGGCAGCAAGGTTGGGAGAGAACCTTTAACAATTGCTTTCTTAGAGTTGATGATGAAATAGAAGGAAAAGTTGGTAGAACGGTCGGTGGAGATGTTTTCGATACAAGCTTTGAGCCTGTTGCCCCGGAAACTGTTGGCTCGACTGCTGTTGTTGCGTTGGTTTGTTCATCACACATCATTGTTGCGAACTGTGGTGATTCAAGAGCAGTCCTATGCCGTGGTAAAGAACCCATGGCTTTATCGGTCGATCATAAACCAAATCGGGAAGACGAGTATGCTCGGATTGAATCGTCTGGAGGCAAGGTCATTCAGTGGAACGGACATCGTGTGTTCGGAGTTCTTGCAATGTCTAGATCGATTGGTGATAGATATTTGAAGCCATGGATTATTCCTGATCCGGAAGTTATGTGCTTTGCTCGAGCGAAAGAAGACGAGTGTCTTATTTTAGCGAGCGACGGACTGTGGGATGTGATGACAAATGAGGAAGTGTGTGAAGTAGCTCGGAGGCGGATTCTGCTTTGGCACAAGAAACACGGGGCGTCGGCTTCGTGTCTCGGCAATCGAGGCACGGGAGTTGACCCAGCTGCACAAGCTGCTGCAGATTACCTCTCCATGCTTGCTCTCCAAAAGGGAAGCAAAGACAATATCTCTGTGATTGTAGTGGACTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCTTAA 1557 44.89 MMEEMSPAVSLTLSLGNSKSDSSESPGHVEYARLKLVTDTVGSIGNGSFHDFNGIVDGLTVSRPTDNGQGINTFWGLLPKNGTNLSVDKEDALLSTLDYPDEMIDDGLFGINGGVKIGDVSNGHIVAKAIILVESGNIPTNELIVATVSPDLEVSASSELHAAPAVVFESKGGDSVHKGVRSVFERDCIPLWGSVSICGRRPEMEDAISSVPCFAKIPIKMLVGNDLVNGIGQSLTHINSHFFGVYDGHGGPQVADYCRERIHVALAEEIRDFKQDRNNGSNGENWQQGWERTFNNCFLRVDDEIEGKVGRTVGGDVFDTSFEPVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYARIESSGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVMCFARAKEDECLILASDGLWDVMTNEEVCEVARRRILLWHKKHGASASCLGNRGTGVDPAAQAAADYLSMLALQKGSKDNISVIVVDLKAQRKFKTKS 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8770583 8773627 + Cp4.1LG03g14520.1 Cpe03g01059 466776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01059 518 MobiDBLite consensus disorder prediction 10 25 - -
Cpe03g01059 518 PANTHER PROTEIN PHOSPHATASE 2C 16 98 518 - -
Cpe03g01059 518 SMART PP2C_4 181 506 IPR001932 -
Cpe03g01059 518 MobiDBLite consensus disorder prediction 1 26 - -
Cpe03g01059 518 CDD PP2Cc 193 508 IPR001932 -
Cpe03g01059 518 ProSitePatterns PPM-type phosphatase domain signature. 242 250 IPR000222 GO:0043169
Cpe03g01059 518 Gene3D - 178 518 IPR036457 -
Cpe03g01059 518 Pfam Protein phosphatase 2C 229 501 IPR001932 -
Cpe03g01059 518 PANTHER ALPHABET, ISOFORM E-RELATED 98 518 - -
Cpe03g01059 518 SUPERFAMILY PP2C-like 182 509 IPR036457 -
Cpe03g01059 518 ProSiteProfiles PPM-type phosphatase domain profile. 191 508 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01730 Cpe03g01059 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01059 Cpe-Chr3:8770583 Cpe07g00568 Cpe-Chr7:3762139 4.74E-162 dispersed
Cpe02g01730 Cpe-Chr2:14166055 Cpe03g01059 Cpe-Chr3:8770583 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01059 K14497 - csv:101203499 898.271