Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01072 CTCATCACAGCTGCAGCCTTCATATGTTCCACAATCATAGTAATCTTCAAAGCCTCATCCTCTTCAAAGCCTTCACTTCCTTCTGGCTCCCTCGGCCTCCTCTTCGTTTTCAAATCCCATTTATTTGGAAGTCCAACAATTGTATCAACTGATGCTGAAGTTAACAGATTTGTTCTACAAAGTGATGCAAAGGCTTTTGTGACATCTTATCCAAAATCTGTGACGGATTTGATGGGAAAAGCTTCTATTTTGCTCATTAATGGCCCTTTGCATAGAAGAATTCATGGTCTTATTGGAGCATTCTTCAAGTCAGCTCATCTTAAAGCTCAATTAACCATTGATATGCAGAAATTTCTTCAAAAATCCATGTCTACTTGGATTTATGTTTTTTTCGACATTTTATGTCTTAAAAATTTGTGTTGTCATATGATGAAAACAACAACAAAAGAGAGAATCAAACAATTGGCCAAAAGGAAAATGGTTAAGTTAGTGGAAGAAATAATAGAAGGTAAAAGAAAGAAGATGAATGAGAATTTGAGTAATAATAGAGTCCCAAATGATGTTGTGGATATCTTGCTGAATGATGGAAGCCACCAAGTTACTGATGAACTCATAGCAGATAATATCATTGATATGATGATTCCCGGCCAAGATTCAGAAGAAAACATGGAATTGAAAAGACTGAAAACCCAGCTTGGAGAGCCATTGAAGTGGACTGATTACTTGTCATTACCATTTACACAAAATGTCATAACGGAGACGTTGAGGATGGGGAATATAATAACCGGAGTGATGAGAAAGGCGGTGAAGGACGTCGAGATAAAAGGGTATCTAATACCTAAAGGATGGTGTGTTCTTGTATATTTTAGGTCAGTTCATGTTGATGAAGAACACTTTGAAAGTCCTTACCATTTTAATCCATGGAGATGGCAAGATAAAGACTCAAACAGCTTGAATTTCACTCCTTTTGGTGGAGGACAAAGGTTGTGCCCTGGACTTGAGTTGGCCAGACTAGAGACTTCCATTTTCTTGCATCACTTTGTCACTGAATTCAGGTGGGTGGCTGAGGAAGACAACATTATAAACTTCCCAACAGTAAGAATGAAGAAGAGAATGGCAATTTGGGTAAAGAAGAGAGAGGACCAA 1146 37.87 LITAAAFICSTIIVIFKASSSSKPSLPSGSLGLLFVFKSHLFGSPTIVSTDAEVNRFVLQSDAKAFVTSYPKSVTDLMGKASILLINGPLHRRIHGLIGAFFKSAHLKAQLTIDMQKFLQKSMSTWIYVFFDILCLKNLCCHMMKTTTKERIKQLAKRKMVKLVEEIIEGKRKKMNENLSNNRVPNDVVDILLNDGSHQVTDELIADNIIDMMIPGQDSEENMELKRLKTQLGEPLKWTDYLSLPFTQNVITETLRMGNIITGVMRKAVKDVEIKGYLIPKGWCVLVYFRSVHVDEEHFESPYHFNPWRWQDKDSNSLNFTPFGGGQRLCPGLELARLETSIFLHHFVTEFRWVAEEDNIINFPTVRMKKRMAIWVKKREDQ 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8866961 8871858 + Cp4.1LG03g14480.1 Cpe03g01072 466789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01072 382 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 323 332 IPR017972 GO:0005506|GO:0016705
Cpe03g01072 382 Pfam Cytochrome P450 233 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g01072 382 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 36 373 - -
Cpe03g01072 382 Gene3D Cytochrome P450 222 379 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g01072 382 Gene3D Cytochrome P450 16 221 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g01072 382 PRINTS B-class P450 signature 86 97 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g01072 382 PRINTS B-class P450 signature 266 293 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g01072 382 PRINTS B-class P450 signature 294 309 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g01072 382 PRINTS B-class P450 signature 321 330 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g01072 382 PRINTS B-class P450 signature 330 341 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g01072 382 SUPERFAMILY Cytochrome P450 36 379 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe03g01072 382 PANTHER CYTOCHROME P450 26 36 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01072 Cpe-Chr3:8866961 Cpe19g00830 Cpe-Chr19:6188942 3.16E-79 dispersed
Cpe12g00626 Cpe-Chr12:6167313 Cpe03g01072 Cpe-Chr3:8866961 1.52E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01072 K12638 - csv:101212581 535.413