Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01094 ATGTTTTCATCAATGAATCCTGTACGATTTTCCAGTTTGGGCTTCCTTCTATACTTTGCCCTTCTTCTTCAACATCATTCCCTCTGTTCCTCTTATCCCATGCCCTTAAATTGTACGGATACGACCCGTTTATGCACCTCGTTTCTGGCCTTTGAGCCTCGCCCAAATCAGACCCTTTCTGTGATCCAGAGTATGTTCGACGTATTGCCTGAAGATGTTACTGTCGAAGGAAATGGTCGGGATTACGTGTTTATCAGGAAGAACTGCTCCTGTGCTTCTGGGTTGAAGAAATATATAACCAACACAACTCTTACCATCAAATCCAATCGAGGGTATGTCTATGACATAGTCATGGAAGCGTATGATGGGCTTGCGTTGTTGCCCAATACAACCCGAATGGCGAGGAACGGTGCTGTTGTGTCTTTGAGGCTGTTTTGTGCCTGTTCAAGTGGGTTGTGGAACTATTTGATGAGCTATGTGATGAGAGATGGCGATACCATAGAGTCTTTAGCTAGCCGATTTGGGGTTAGTATGGATAGCATTGAGTCGGTGAATGGAATTGAAAATCCAGGCAATGTCACTGTGGGTGCTTTGTATTATATTCCCTTGAATTCGGTTCCTGGCGATCCTTATCCATTGGAGACAGACATTTCTGCTGCTCCTGCTCCAGCTCCTTCCTTTACTCTGAACAATTTCACAGATAATGCTGAAACCCCCAAACGTGATCCTCCATATATATGGATTGTTGGAAGTTTGGGAATTATTCTTGTTCTGATTTTAGTTGGCATAGTAAGTTATGCTTGCTTCAGGTGGTTGAAATGCTTTTCTAGATCAAGGAGTAGCCACTCCAAAGATCCCGGTGGCAAGGTTCCCCACAAGTTCCATATTCTTGGCAAGTCAAGTTTCTGCTGTGCTTCAGGAAGGTACATTTGCTGCAGTTCTGCAGCTTGGAAGCAAGCCAACGGGGAGTCTAGTGACAACCAGAGTGCATTTCCGAAAGTTATCGAGAGCAATGTATTTGACGTAGACAAACCTGTGGTTTTTTCATACGAAGAAATTTTTTCCTCAACCGATGGTTTCTCTGATTCGAGTCTACTTGGCCATGGAACTTATGGTTCAGTGTATTATGGTATCCTGCGTGATCAGGAAGTTGCTATAAAAAGAATGACTGCAACAAAAACTAAAGAGTTCATGGCAGAGATGAAAGTCCTGTGCAAGGTTCATCATGCAAACCTGATTTCTGACTTTGGGTTGGCCAAACTTGTTGGAAAAACAAATGAGGGTGAAGCTACTGTAACGAAAGTTGTCGGTACATACGGTTACCTGGCTCCTGAATATTTGAGTAATGGGCTTGCGACAACGAAAAGTGATGTGTATGCTTTCGGTGTCGTTCTTTTTGAGCTTATATCTGGAAAGGAGGCAATTATACGAACTGAGGGAACAACTATGAGAAATCCTGAAAGACGTTCACTAGCATCAGTTATGTTAGCTGTTCTTCGGAACGCTCCTGATTCTATGAATATGGCAAGTTTGAAAGATCAAGTTGATCCAAGTATGATGGATTTGTATCCTCATGACTGTCTATTCAAGGTGGCCATGTTGGCAAAGCAGTGTGTGGATGAGGATCCCATCTTACGACCCGACATGAAGCAAGTCGTAATATCCTTGTCGCAGATCCTACTGTCTTCGGTCGAATGGGAAGCGACTCTAGCTGGTAACAGCCAAGTTTTTAGTGGCCTAGTCCAAGGAAGATAG 1755 43.53 MFSSMNPVRFSSLGFLLYFALLLQHHSLCSSYPMPLNCTDTTRLCTSFLAFEPRPNQTLSVIQSMFDVLPEDVTVEGNGRDYVFIRKNCSCASGLKKYITNTTLTIKSNRGYVYDIVMEAYDGLALLPNTTRMARNGAVVSLRLFCACSSGLWNYLMSYVMRDGDTIESLASRFGVSMDSIESVNGIENPGNVTVGALYYIPLNSVPGDPYPLETDISAAPAPAPSFTLNNFTDNAETPKRDPPYIWIVGSLGIILVLILVGIVSYACFRWLKCFSRSRSSHSKDPGGKVPHKFHILGKSSFCCASGRYICCSSAAWKQANGESSDNQSAFPKVIESNVFDVDKPVVFSYEEIFSSTDGFSDSSLLGHGTYGSVYYGILRDQEVAIKRMTATKTKEFMAEMKVLCKVHHANLISDFGLAKLVGKTNEGEATVTKVVGTYGYLAPEYLSNGLATTKSDVYAFGVVLFELISGKEAIIRTEGTTMRNPERRSLASVMLAVLRNAPDSMNMASLKDQVDPSMMDLYPHDCLFKVAMLAKQCVDEDPILRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9027335 9039004 + Cp4.1LG03g14200.1 Cpe03g01094 466811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01094 584 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 413 584 IPR044812 GO:0019199|GO:0045087
Cpe03g01094 584 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 36 413 IPR044812 GO:0019199|GO:0045087
Cpe03g01094 584 SUPERFAMILY LysM domain 157 202 IPR036779 -
Cpe03g01094 584 Pfam LysM domain 159 196 IPR018392 -
Cpe03g01094 584 SUPERFAMILY Protein kinase-like (PK-like) 344 563 IPR011009 -
Cpe03g01094 584 ProSitePatterns Protein kinases ATP-binding region signature. 366 387 IPR017441 GO:0005524
Cpe03g01094 584 PANTHER BNAA06G02020D PROTEIN 36 413 - -
Cpe03g01094 584 CDD LysM 158 201 IPR018392 -
Cpe03g01094 584 Gene3D LysM domain 154 207 IPR036779 -
Cpe03g01094 584 Gene3D Phosphorylase Kinase; domain 1 324 416 - -
Cpe03g01094 584 Pfam Protein kinase domain 413 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01094 584 SMART LysM_2 158 202 IPR018392 -
Cpe03g01094 584 PANTHER BNAA06G02020D PROTEIN 413 584 - -
Cpe03g01094 584 ProSiteProfiles LysM domain profile. 157 201 IPR018392 -
Cpe03g01094 584 Gene3D Transferase(Phosphotransferase) domain 1 417 575 - -
Cpe03g01094 584 ProSiteProfiles Protein kinase domain profile. 99 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01695 Cpe03g01094 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01094 Cpe-Chr3:9027335 Cpe18g00626 Cpe-Chr18:6489675 6.99E-34 dispersed
Cpe01g01557 Cpe-Chr1:9275385 Cpe03g01094 Cpe-Chr3:9027335 1.96E-46 transposed
Cpe08g00302 Cpe-Chr8:1925041 Cpe03g01094 Cpe-Chr3:9027335 4.27E-23 transposed
Cpe02g01695 Cpe-Chr2:13949794 Cpe03g01094 Cpe-Chr3:9027335 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62297 PF00069 Pkinase 5.90E-15 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01094 - - csv:101213624 735.332