Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01125 ATGGAGAATCTCAGGACTCCATTTAGGGGTATTGTGGATGATATCAGAGGAAGAAAAGCCTGTTATAAGCAAGATTGGGTTGATGGTCGACTTTCAGGAATCGGAATTTTGGCCCCAACTGCCTACGTTTTTTTCGCTTCTGCACTTCCTGTCATTGCTTTCGGTGCGCAACTGAGCCGAGATACAGATGGAAGCTTGAGTGCAGTAGAAACATTGGCTTCCACAGCCATTTGCGGCATCCTTCATTCAATTCTTGGTGGGCAGCCTCTCCTAATTGTAGGTGTTGCAGAACCTACAATTATTATGTATACCTATTTGTACAATTTTAGCAAGGATAGGAAAGATATAGGGGGAGAACTCTTCTTGGCTTGGGCCGGATGGGTTTGTGTCTGGACAGCCCTCTTGCTGTTTCTTCTTGCTATATTCAATGCTTCCAGACTAATCAACAGATTTACAAGGATTGCAGGGGAGCTTTTTGGCATGTTAATCTCCGTTCTGTTCATTCAAGAAGCTATTAAGGGAGTGTTGAGTGAATTTGAAGTTCCCCATGCTGAGGATAAAAGTTTAGAGAAATATCAATTTCATTGGCTTTACACGAATGGATTACTGGGAATCATATTTACTTTTGGCCTTCTCTATACTGCCTTGAAGAGCAGAAAGGCAAGATCATGGTTGTATGGGACAGGTTTGTCAATGCAATGCAGATTGATTCTCTTGAGCAATTACTCCGATGAACGTTCTAAGCATACTGATAAACTCTCACTGTGTCCCATAGGCTGGCTAAGGAGTTTCATTGCAGACTACGGAGTTCCTCTGATGGTTCTAGTATGGACTGCACTATCATTTGCTGTACCAAGCAAAGTCCCCTCTGGAGTTCCTAGAAGACTTCAAAGTCCTTTGGCATGGCAATCTACTTCTCTGCACCATTGGACAGTTGTCATGGACATGGGGAAGATACCTCCTGCATACATTTTTGCTGCCTTCATTCCTGCTGTAATGATTGCAGGACTTTATTTTTTTGATCATAGTGTTGCATCTCAGCTGGCACAGCAAAAGGAGTTTAATCTCAAGAACCCTTCTGCATACCACCATGACATCCTGTTGCTGGGATTTATGACGTTGCTTTGCGGGTTAATCGGGCTTCCTCCTTCGAATGGGGTTTTGCCACAGTCCCCCATGCACACCAAGTGTCTTGCAACTCTCAGAAGGCGTTTGATGCGAAGGAAGATGGTAGAAAGTGCAAAGGAAGGCATAAAAAGGAAAGCTAGTGATTCCGAAATCTACGGTCAAATGCAAGCTGTGTTCTTAGAAATGGAGAGCAGCCCAATTACAACATCAGTAGTCAAAGAGCTGGAAGATTTGAAGGAGGCAATCATGAAAGGTGATACTAATCATGAAAACACAAAGGATACATTTGACCCAGAGAAGCATATTGATGCTTATCTTCCTGTTCGAGTGAACGAGCAAAGATTGAGCAATCTGCTGCAATCACTTCTGGTGGCAGCATCAGTATTTGCTTTACCAGCAATAAAGAAGATACCAACATCAGTTCTCTGGGGATATTTCGCGTACATGGCCATCGACAGTCTACCTGGAAACCAATTTTGGGAAAGGATTTTACTTCTCTTTGTAATGCCTAGTCGACGTTACAAGGTCCTAGAAGGCTTTCATGCTTCCTTTGTGGAGTCTGTGCCATTCAAATACATAGCCGCATTCACTCTATTTCAATTTGTGTATTTTCTCATTTGTTATGGAGTGACTTGGATCCCCATAGCTGGAGTGTTGTTTCCTTTGCCTTTCTTCCTCCTCATTGGCATAAGACATCGCATCCTTCCCAAGCTACTCCAACCCCGTTATTTGCAGGAGCTCGACGCAGCTGAGTATGAAGAACTAACCGGTACTCCGACTGTCTCGCTTAGCCTTTCTATCAAGGAAATGAATACCACTCAAATGGTTAATAATGAAGATAAAGTTGAAATATGTGATGCTGAACTACTAGATGAGTTGACAACCCACAGAGGGGAGTTGAAGGTTAGAGCTAAAAGCTTCAACGAGGATAGACAGGGTCAGATCCATCCCGACTAA 2085 43.26 MENLRTPFRGIVDDIRGRKACYKQDWVDGRLSGIGILAPTAYVFFASALPVIAFGAQLSRDTDGSLSAVETLASTAICGILHSILGGQPLLIVGVAEPTIIMYTYLYNFSKDRKDIGGELFLAWAGWVCVWTALLLFLLAIFNASRLINRFTRIAGELFGMLISVLFIQEAIKGVLSEFEVPHAEDKSLEKYQFHWLYTNGLLGIIFTFGLLYTALKSRKARSWLYGTGLSMQCRLILLSNYSDERSKHTDKLSLCPIGWLRSFIADYGVPLMVLVWTALSFAVPSKVPSGVPRRLQSPLAWQSTSLHHWTVVMDMGKIPPAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKNPSAYHHDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMVESAKEGIKRKASDSEIYGQMQAVFLEMESSPITTSVVKELEDLKEAIMKGDTNHENTKDTFDPEKHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLEGFHASFVESVPFKYIAAFTLFQFVYFLICYGVTWIPIAGVLFPLPFFLLIGIRHRILPKLLQPRYLQELDAAEYEELTGTPTVSLSLSIKEMNTTQMVNNEDKVEICDAELLDELTTHRGELKVRAKSFNEDRQGQIHPD 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9240831 9245809 + Cp4.1LG03g13870.1 Cpe03g01125 466842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01125 694 Pfam HCO3- transporter family 484 574 IPR011531 GO:0006820|GO:0016021
Cpe03g01125 694 Pfam HCO3- transporter family 260 403 IPR011531 GO:0006820|GO:0016021
Cpe03g01125 694 Pfam HCO3- transporter family 7 181 IPR011531 GO:0006820|GO:0016021
Cpe03g01125 694 Gene3D Helical hairpin bin 18 60 - -
Cpe03g01125 694 PANTHER BORON TRANSPORTER 4-RELATED 1 693 - -
Cpe03g01125 694 PANTHER ANION EXCHANGE PROTEIN 1 693 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01125 Cpe-Chr3:9240831 Cpe07g00280 Cpe-Chr7:1844904 0 dispersed
Cpe03g01125 Cpe-Chr3:9240831 Cpe11g00345 Cpe-Chr11:1871037 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01125 K24194 - csv:101210964 1147.11