Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01169 ACAATGGCCGACGACAAAGTGGGCGTAGGCAACAACAACTTGGGTAGCCGAAAGCCTTCATGGGCCACCCTCCGCCGTGTCGACTCCCTCAATCTCGAGGCCGGAAGGATTCCGAGCATGGGAGTAGTGTACGGCGACATCGGAACATCACCGTTGTACGTGTTTGCGAGCACTTTCAGCAACGGCATCGACAACACGGAGGACGTGATCGGAGTTCTGTCGCTTATAATCTACACCATAGCGTTGGTTCCATTATTGAAGTACGTTTTGATTGTGTTGTGGGCGAATGACAACGGCGACGGTGGGACGTTCGCTCTATATTCGCTGCTGTGCCGCTACGTGAAAGTGGGATTGATTCCAAATGACCAGCCAGAGGACAGGGAACTGTCCAATTACCAGCTGGTCGTGCCTTCCAACCTGAGACGGTCTCAGAAAGTGAAGGAGAAGCTTGAGAACAGTATGTTTGCAAAGGTTGCCCTTTTTCTTCTCACCATTGCTGGGACTTCCATGGTTATTGGAGATGGGGTTCTCACTCCCGCTATCTCAGATGCGGTTGTGGGGATATCAGTAGCAATTCTTGTGATCCTGTTCAGCATTCAACGATTTGGAACAGACAAAGTGGGGTTCTCGTTTGCCCCAATAATCTTTATATGGTTTTCATTCATTGGTGGCATTGGCCTCTTCAACTTGTTCAAGCATGACCCTGCCGTTCTCAAAGCTTTTAACCCTAAATATATCTTTGATTACTTCAAAAGAAATGGCAGCCAAGCTTGGGTTTCCCTTGGTGGAGTTTTTCTTTGCATTACAGCTGCCTACAGTGGGCAAGCTGCATATCTAAGAAAATTCCCGGGCCACGTCGGCAATACTTTCTACGATTCAATTCCAGGTCCTTTGTACTGGCCAACGTTCGTAGTTGCGGTGGCGGCATCAATCATAGCAAGCCAAGCAATGATCTCAGGAGCATTTGCAATAATATCACAGTCCTTGTCTTTAGGCTGCTTCCCCAGAGTTAAAGTCGTCCATACTTCACACAAGTACGAAGGCCAAGTCTACATCCCGGAGATCAATTACCTTCTAATGTTGGCTTGTGTCATCGTCAGCGCTGCCTTCCAAACCACGGAGAACATCGGCCACGCTTACGGCATCGCCGTCGTCACCGTCATGATCATGACCACTGGCATGGTTTCTCTCATCATGATCGTCATTTGGAAAACCAGCATTTGGTGGATCGCTTTGTTCCTTCTCGTCTTCGGCTCCATCGAGCTTCTCTACTTCTCATCCGTCCTCTATAAGTTCACTCAAGGAGGGTTTCTCCCCCTCGTCCTTGCTCTTTTCCTCATGGCTGTCATGATCGTTTGGCACTATGTTCATAGGGAGAGATACGTTTTCGAGCTCAAAAACAAGGTCTCCTCTGGCTACATAACCGAGTTGGCTTGTAACCCTAATGTCAACCGAATTCCTGGAATTGGCCTTCTCTACTCCGAGTTGGTTCAGGGTATTCCTCCTATCTTCCCTCACTTCATTTCCAGCATTCCCTCGGTTCATTCTGTCATCGTCTTCGTCTCCATCAAGTCCATTCCGATCAGCAAAGTCGAGCCCAAGGAGCGATATGGATACAAAGACGTGATCACCGGATCAGCCGAGTTCGAGCGGCAGCTGGTGGACAGTTTGAAAGAATTCATACGCCAAGAACACATAATGCTGGAAGGGATCCCATTAGAGCCAACCTCAAACCAGAGCCACTCAGGCAAAATAGAACCAACAAAAGCAAAACCCTCTTCTTCATCTGCAGCAACAGTGCACGTCGAAGGAACTGCAGCGGAAGTAGCGAGCCAGTCACAGCGCTCATCGGGGTCCATTCAGTCGTTCAACGCTTCAAAATCGAGGCACTCATCGAACGCCATAGCTGCGGGAGGGGCAGTAGAAGAAGAGATGCAGTTCGTAGAGAAAGCAATGGAGAAAGGCGTGGTTTATCTGTTGGGAGAAGCAGAGGTGGTGGCTGAGCCAGAATCTTCACTGTTTAAGAAGATAGTGGTGAATTATGCCTATAGTTTCTTGAGGAAGAACTTTAGGCAAGGGGAGAATATTCTTGAGATTCCTCGTACCAGGCTTCTAAGGGTTGGAATGACTTATGAAATATGA 2142 48.51 TMADDKVGVGNNNLGSRKPSWATLRRVDSLNLEAGRIPSMGVVYGDIGTSPLYVFASTFSNGIDNTEDVIGVLSLIIYTIALVPLLKYVLIVLWANDNGDGGTFALYSLLCRYVKVGLIPNDQPEDRELSNYQLVVPSNLRRSQKVKEKLENSMFAKVALFLLTIAGTSMVIGDGVLTPAISDAVVGISVAILVILFSIQRFGTDKVGFSFAPIIFIWFSFIGGIGLFNLFKHDPAVLKAFNPKYIFDYFKRNGSQAWVSLGGVFLCITAAYSGQAAYLRKFPGHVGNTFYDSIPGPLYWPTFVVAVAASIIASQAMISGAFAIISQSLSLGCFPRVKVVHTSHKYEGQVYIPEINYLLMLACVIVSAAFQTTENIGHAYGIAVVTVMIMTTGMVSLIMIVIWKTSIWWIALFLLVFGSIELLYFSSVLYKFTQGGFLPLVLALFLMAVMIVWHYVHRERYVFELKNKVSSGYITELACNPNVNRIPGIGLLYSELVQGIPPIFPHFISSIPSVHSVIVFVSIKSIPISKVEPKERYGYKDVITGSAEFERQLVDSLKEFIRQEHIMLEGIPLEPTSNQSHSGKIEPTKAKPSSSSAATVHVEGTAAEVASQSQRSSGSIQSFNASKSRHSSNAIAAGGAVEEEMQFVEKAMEKGVVYLLGEAEVVAEPESSLFKKIVVNYAYSFLRKNFRQGENILEIPRTRLLRVGMTYEI 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9565110 9570833 - Cp4.1LG03g13470.1 Cpe03g01169 466886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01169 713 Pfam K+ potassium transporter 271 543 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe03g01169 713 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 271 712 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe03g01169 713 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 270 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe03g01169 713 MobiDBLite consensus disorder prediction 571 625 - -
Cpe03g01169 713 MobiDBLite consensus disorder prediction 573 625 - -
Cpe03g01169 713 PANTHER POTASSIUM TRANSPORTER 5 271 712 - -
Cpe03g01169 713 PANTHER POTASSIUM TRANSPORTER 5 15 270 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00769 Cpe-Chr3:4753652 Cpe03g01169 Cpe-Chr3:9565110 6.25E-150 dispersed
Cpe03g01169 Cpe-Chr3:9565110 Cpe20g00853 Cpe-Chr20:7677981 0 dispersed
Cpe03g01169 Cpe-Chr3:9565110 Cpe14g00213 Cpe-Chr14:1199654 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01169 K03549 - csv:101205628 1056.97