Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g01208 | ATGATTGCGAGCTCTCTTTGCAATGCTTCTGCTAAATTTCCGGCAGAAGTGATGGAGGTAGAAACGATGATGGAACATAAGAGAAGTCTATGCTCTGTTGATGAGAGCAGTCTCACCTCTCTTACATCCAAGCGACATAAGACTGGTTTTTCTATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAGTTTTGGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAGGCAATGGAATATATCCAGTTCCTTCATAAGCAAGTCAAGGTGTTGAGTGCTCCATATCTTCAAAGCACACCCACTGCTCAGTTGCAGGAGAAGGAGCCATGCAGCCACAGCCTGAGGAGCAGAGGTTTATGTCTCGTTCCAATCTCGTGTATTGCCGGAGTTGCAAGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAATTTCCCCGAAATTCAAGAACGCCATCTCGCCATTCGATTGA | 504 | 46.43 | MIASSLCNASAKFPAEVMEVETMMEHKRSLCSVDESSLTSLTSKRHKTGFSISSKERKDKLGERVLALQQLVSPYGKTDTASVLLEAMEYIQFLHKQVKVLSAPYLQSTPTAQLQEKEPCSHSLRSRGLCLVPISCIAGVASSNGADIWAPVKTISPKFKNAISPFD | 167 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 9873308 | 9877674 | + | Cp4.1LG03g13090.1 | Cpe03g01208 | 466925 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g01208 | 167 | CDD | bHLH_AtbHLH_like | 51 | 102 | IPR045239 | - | |
Cpe03g01208 | 167 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 47 | 108 | IPR036638 | GO:0046983 | |
Cpe03g01208 | 167 | PANTHER | TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 | 17 | 151 | - | - | |
Cpe03g01208 | 167 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 45 | 94 | IPR011598 | GO:0046983 | |
Cpe03g01208 | 167 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 17 | 151 | - | - | |
Cpe03g01208 | 167 | Gene3D | - | 42 | 118 | IPR036638 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g01208 | Cpe-Chr3:9873308 | Cpe04g01116 | Cpe-Chr4:9662278 | 5.43E-34 | dispersed | |
Cpe03g01208 | Cpe-Chr3:9873308 | Cpe08g00059 | Cpe-Chr8:397738 | 1.14E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g01208 | - | - | csv:101218499 | 297.36 |