Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01208 ATGATTGCGAGCTCTCTTTGCAATGCTTCTGCTAAATTTCCGGCAGAAGTGATGGAGGTAGAAACGATGATGGAACATAAGAGAAGTCTATGCTCTGTTGATGAGAGCAGTCTCACCTCTCTTACATCCAAGCGACATAAGACTGGTTTTTCTATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAGTTTTGGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAGGCAATGGAATATATCCAGTTCCTTCATAAGCAAGTCAAGGTGTTGAGTGCTCCATATCTTCAAAGCACACCCACTGCTCAGTTGCAGGAGAAGGAGCCATGCAGCCACAGCCTGAGGAGCAGAGGTTTATGTCTCGTTCCAATCTCGTGTATTGCCGGAGTTGCAAGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAATTTCCCCGAAATTCAAGAACGCCATCTCGCCATTCGATTGA 504 46.43 MIASSLCNASAKFPAEVMEVETMMEHKRSLCSVDESSLTSLTSKRHKTGFSISSKERKDKLGERVLALQQLVSPYGKTDTASVLLEAMEYIQFLHKQVKVLSAPYLQSTPTAQLQEKEPCSHSLRSRGLCLVPISCIAGVASSNGADIWAPVKTISPKFKNAISPFD 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9873308 9877674 + Cp4.1LG03g13090.1 Cpe03g01208 466925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01208 167 CDD bHLH_AtbHLH_like 51 102 IPR045239 -
Cpe03g01208 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 108 IPR036638 GO:0046983
Cpe03g01208 167 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 17 151 - -
Cpe03g01208 167 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Cpe03g01208 167 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 151 - -
Cpe03g01208 167 Gene3D - 42 118 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01208 Cpe-Chr3:9873308 Cpe04g01116 Cpe-Chr4:9662278 5.43E-34 dispersed
Cpe03g01208 Cpe-Chr3:9873308 Cpe08g00059 Cpe-Chr8:397738 1.14E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01208 - - csv:101218499 297.36